RNA–Protein interactions for RNA: ENST00000540684.5

LINC00944-202, long intergenic non-protein coding RNA 944, humanhuman

TSL 1 (best) BASIC

Gene LINC00944, Length 888 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00944-202ENST00000540684 AEBP2Q6ZN18 517 aaPredicted RBP21.12■□□□□ 0.97
LINC00944-202ENST00000540684 CHIC1Q5VXU3 224 aa20.21■□□□□ 0.83
LINC00944-202ENST00000540684 SENP3Q9H4L4 574 aaPredicted RBP17.82■□□□□ 0.44
LINC00944-202ENST00000540684 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
LINC00944-202ENST00000540684 FOXD1Q16676 465 aa16.67■□□□□ 0.26
LINC00944-202ENST00000540684 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
LINC00944-202ENST00000540684 PPP6R1Q9UPN7 881 aa15.82■□□□□ 0.12
LINC00944-202ENST00000540684 ADRA2BP18089 450 aa15.72■□□□□ 0.11
LINC00944-202ENST00000540684 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
LINC00944-202ENST00000540684 MSH5O43196 834 aa15.4■□□□□ 0.06
LINC00944-202ENST00000540684 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
LINC00944-202ENST00000540684 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
LINC00944-202ENST00000540684 PPP4R3CPQ6ZMV5 832 aa14.24□□□□□ -0.13
LINC00944-202ENST00000540684 DMRT2Q9Y5R5 561 aa14.24□□□□□ -0.13
LINC00944-202ENST00000540684 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
LINC00944-202ENST00000540684 CNKSR2Q8WXI2 1034 aa13.89□□□□□ -0.19
LINC00944-202ENST00000540684 HOXD11P31277 338 aaPredicted RBP13.83□□□□□ -0.2
LINC00944-202ENST00000540684 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
LINC00944-202ENST00000540684 NCBP3Q53F19 620 aaKnown RBP13.65□□□□□ -0.22
LINC00944-202ENST00000540684 NPM3O75607 178 aaKnown RBP13.61□□□□□ -0.23
LINC00944-202ENST00000540684 KCNA4P22459 653 aa13.57□□□□□ -0.24
LINC00944-202ENST00000540684 DCAF8L1A6NGE4 600 aa13.46□□□□□ -0.25
LINC00944-202ENST00000540684 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
LINC00944-202ENST00000540684 RNF39Q9H2S5 420 aa13.25□□□□□ -0.29
LINC00944-202ENST00000540684 CACNB1Q02641 598 aaPredicted RBP13.03□□□□□ -0.32
LINC00944-202ENST00000540684 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC00944-202ENST00000540684 C1QBPQ07021 282 aaKnown RBP13.01□□□□□ -0.33
LINC00944-202ENST00000540684 SLC4A2P04920 1241 aa13□□□□□ -0.33
LINC00944-202ENST00000540684 U3KPZ7 1027 aaPredicted RBP12.93□□□□□ -0.34
LINC00944-202ENST00000540684 SLC4A1APQ9BWU0 796 aaKnown RBP12.77□□□□□ -0.37
LINC00944-202ENST00000540684 SPINK5Q9NQ38 1064 aaPredicted RBP12.65□□□□□ -0.38
LINC00944-202ENST00000540684 ZBTB22O15209 634 aa12.56□□□□□ -0.4
LINC00944-202ENST00000540684 FOXD4L1Q9NU39 408 aa12.53□□□□□ -0.4
LINC00944-202ENST00000540684 MYCNP04198 464 aaPredicted RBP12.52□□□□□ -0.41
LINC00944-202ENST00000540684 CAPN15O75808 1086 aa12.49□□□□□ -0.41
LINC00944-202ENST00000540684 DSG3P32926 999 aa12.48□□□□□ -0.41
LINC00944-202ENST00000540684 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.47□□□□□ -0.41
LINC00944-202ENST00000540684 HNRNPUL2Q1KMD3 747 aaKnown RBP12.47□□□□□ -0.41
LINC00944-202ENST00000540684 SAMD1Q6SPF0 538 aaPredicted RBP12.45□□□□□ -0.42
LINC00944-202ENST00000540684 APLP2Q06481 763 aa12.38□□□□□ -0.43
LINC00944-202ENST00000540684 TRHP20396 242 aaPredicted RBP12.36□□□□□ -0.43
LINC00944-202ENST00000540684 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
LINC00944-202ENST00000540684 ATF5Q9Y2D1 282 aaPredicted RBP12.32□□□□□ -0.44
LINC00944-202ENST00000540684 ABCB7O75027 752 aa12.28□□□□□ -0.44
LINC00944-202ENST00000540684 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
LINC00944-202ENST00000540684 POLA2Q14181 598 aa12.12□□□□□ -0.47
LINC00944-202ENST00000540684 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
LINC00944-202ENST00000540684 EHMT2Q96KQ7 1210 aa12□□□□□ -0.49
LINC00944-202ENST00000540684 ZBTB12Q9Y330 459 aaPredicted RBP11.83□□□□□ -0.52
LINC00944-202ENST00000540684 MKRN4PQ13434 485 aaPredicted RBP11.78□□□□□ -0.52
LINC00944-202ENST00000540684 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
LINC00944-202ENST00000540684 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
LINC00944-202ENST00000540684 FBLN2P98095 1184 aa11.62□□□□□ -0.55
LINC00944-202ENST00000540684 AKT1S1Q96B36 256 aa11.61□□□□□ -0.55
LINC00944-202ENST00000540684 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
LINC00944-202ENST00000540684 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
LINC00944-202ENST00000540684 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
LINC00944-202ENST00000540684 REM2Q8IYK8 340 aaPredicted RBP11.54□□□□□ -0.56
LINC00944-202ENST00000540684 POTEHQ6S545 545 aa11.53□□□□□ -0.56
LINC00944-202ENST00000540684 SSUH2Q9Y2M2 353 aa11.51□□□□□ -0.57
LINC00944-202ENST00000540684 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
LINC00944-202ENST00000540684 PITPNM1O00562 1244 aa11.43□□□□□ -0.58
LINC00944-202ENST00000540684 ZNF692Q9BU19 519 aaPredicted RBP11.4□□□□□ -0.58
LINC00944-202ENST00000540684 PIP4P2Q8N4L2 257 aa11.31□□□□□ -0.6
LINC00944-202ENST00000540684 FXR2P51116 673 aaKnown RBP eCLIP11.3□□□□□ -0.6
LINC00944-202ENST00000540684 PABPN1Q86U42 306 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00944-202ENST00000540684 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
LINC00944-202ENST00000540684 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
LINC00944-202ENST00000540684 CLEC11AQ9Y240 323 aa11.18□□□□□ -0.62
LINC00944-202ENST00000540684 PROM2Q8N271 834 aa11.13□□□□□ -0.63
LINC00944-202ENST00000540684 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
LINC00944-202ENST00000540684 PRR29P0C7W0 189 aa11.04□□□□□ -0.64
LINC00944-202ENST00000540684 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
LINC00944-202ENST00000540684 EVX2Q03828 476 aa10.99□□□□□ -0.65
LINC00944-202ENST00000540684 CREBZFQ9NS37 354 aa10.95□□□□□ -0.66
LINC00944-202ENST00000540684 STAG3Q9UJ98 1225 aa10.95□□□□□ -0.66
LINC00944-202ENST00000540684 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
LINC00944-202ENST00000540684 HAX1O00165 279 aa10.92□□□□□ -0.66
LINC00944-202ENST00000540684 SP7Q8TDD2 431 aaPredicted RBP10.92□□□□□ -0.66
LINC00944-202ENST00000540684 FKBP8Q14318 412 aa10.9□□□□□ -0.66
LINC00944-202ENST00000540684 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
LINC00944-202ENST00000540684 MNX1P50219 401 aaPredicted RBP10.86□□□□□ -0.67
LINC00944-202ENST00000540684 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
LINC00944-202ENST00000540684 GABBR2O75899 941 aa10.67□□□□□ -0.7
LINC00944-202ENST00000540684 ZNF579Q8NAF0 562 aaKnown RBP10.64□□□□□ -0.71
LINC00944-202ENST00000540684 NPM1P06748 294 aaKnown RBP eCLIP10.6□□□□□ -0.71
LINC00944-202ENST00000540684 MIER1Q8N108 512 aa10.6□□□□□ -0.71
LINC00944-202ENST00000540684 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
LINC00944-202ENST00000540684 POTEIP0CG38 1075 aa10.55□□□□□ -0.72
LINC00944-202ENST00000540684 RASEFQ8IZ41 740 aa10.54□□□□□ -0.72
LINC00944-202ENST00000540684 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
LINC00944-202ENST00000540684 FBXO3Q9UK99 471 aa10.53□□□□□ -0.72
LINC00944-202ENST00000540684 NUBP1P53384 320 aa10.52□□□□□ -0.73
LINC00944-202ENST00000540684 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
LINC00944-202ENST00000540684 CCDC61Q9Y6R9 512 aa10.51□□□□□ -0.73
LINC00944-202ENST00000540684 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
LINC00944-202ENST00000540684 VASPP50552 380 aaPredicted RBP10.5□□□□□ -0.73
LINC00944-202ENST00000540684 CLCN6P51797 869 aa10.49□□□□□ -0.73
LINC00944-202ENST00000540684 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
LINC00944-202ENST00000540684 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms