RNA–Protein interactions for RNA: ENST00000607607.5

LINC00240-204, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best) BASIC

Gene LINC00240, Length 5,607 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-204ENST00000607607 PPARGC1BQ86YN6 1023 aaKnown RBP10.18□□□□□ -0.78
LINC00240-204ENST00000607607 HRCP23327 699 aa9.96□□□□□ -0.82
LINC00240-204ENST00000607607 SCAF1Q9H7N4 1312 aaKnown RBP9.91□□□□□ -0.82
LINC00240-204ENST00000607607 PELP1Q8IZL8 1130 aaKnown RBP9.77□□□□□ -0.85
LINC00240-204ENST00000607607 PCGF6Q9BYE7 350 aa9.7□□□□□ -0.86
LINC00240-204ENST00000607607 MYO15BQ96JP2 1530 aa9.63□□□□□ -0.87
LINC00240-204ENST00000607607 FAM9AQ8IZU1 332 aaPredicted RBP9.46□□□□□ -0.9
LINC00240-204ENST00000607607 NEUROD1Q13562 356 aa9.43□□□□□ -0.9
LINC00240-204ENST00000607607 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
LINC00240-204ENST00000607607 NISCHQ9Y2I1 1504 aa9.41□□□□□ -0.9
LINC00240-204ENST00000607607 BCL11AQ9H165 835 aa9.38□□□□□ -0.91
LINC00240-204ENST00000607607 GTF3C3Q9Y5Q9 886 aa9.34□□□□□ -0.91
LINC00240-204ENST00000607607 MYT1Q01538 1121 aa9.32□□□□□ -0.92
LINC00240-204ENST00000607607 ACIN1Q9UKV3 1341 aaKnown RBP9.27□□□□□ -0.93
LINC00240-204ENST00000607607 SUPT5HO00267 1087 aaKnown RBP9.19□□□□□ -0.94
LINC00240-204ENST00000607607 LOC105371045A0A1W2PR82 267 aa9.18□□□□□ -0.94
LINC00240-204ENST00000607607 SHROOM4Q9ULL8 1493 aa9.17□□□□□ -0.94
LINC00240-204ENST00000607607 CSRNP3Q8WYN3 585 aa9.09□□□□□ -0.95
LINC00240-204ENST00000607607 CHIC1Q5VXU3 224 aa9.08□□□□□ -0.96
LINC00240-204ENST00000607607 YTHDC1Q96MU7 727 aaKnown RBP9.01□□□□□ -0.97
LINC00240-204ENST00000607607 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
LINC00240-204ENST00000607607 CCDC180Q9P1Z9 1646 aa8.95□□□□□ -0.98
LINC00240-204ENST00000607607 CENPBP07199 599 aaPredicted RBP8.93□□□□□ -0.98
LINC00240-204ENST00000607607 ANP32EQ9BTT0 268 aa8.93□□□□□ -0.98
LINC00240-204ENST00000607607 DCAF1Q9Y4B6 1507 aa8.93□□□□□ -0.98
LINC00240-204ENST00000607607 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
LINC00240-204ENST00000607607 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.88□□□□□ -0.99
LINC00240-204ENST00000607607 DIEXFQ68CQ4 756 aaKnown RBP8.87□□□□□ -0.99
LINC00240-204ENST00000607607 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
LINC00240-204ENST00000607607 TTBK1Q5TCY1 1321 aaPredicted RBP8.83□□□□□ -1
LINC00240-204ENST00000607607 ZEB1P37275 1124 aaPredicted RBP8.83□□□□□ -1
LINC00240-204ENST00000607607 APLP2Q06481 763 aa8.82□□□□□ -1
LINC00240-204ENST00000607607 EHMT2Q96KQ7 1210 aa8.81□□□□□ -1
LINC00240-204ENST00000607607 CCDC136Q96JN2 1154 aa8.8□□□□□ -1
LINC00240-204ENST00000607607 MIER1Q8N108 512 aa8.77□□□□□ -1.01
LINC00240-204ENST00000607607 SUPT16HQ9Y5B9 1047 aaKnown RBP8.75□□□□□ -1.01
LINC00240-204ENST00000607607 SALL2Q9Y467 1007 aaPredicted RBP8.74□□□□□ -1.01
LINC00240-204ENST00000607607 MSH5O43196 834 aa8.73□□□□□ -1.01
LINC00240-204ENST00000607607 TRIM41Q8WV44 630 aa8.69□□□□□ -1.02
LINC00240-204ENST00000607607 BCANQ96GW7 911 aa8.66□□□□□ -1.02
LINC00240-204ENST00000607607 CCER1Q8TC90 406 aaPredicted RBP8.63□□□□□ -1.03
LINC00240-204ENST00000607607 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
LINC00240-204ENST00000607607 PLEKHG5O94827 1062 aa8.6□□□□□ -1.03
LINC00240-204ENST00000607607 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
LINC00240-204ENST00000607607 ERICH6Q7L0X2 663 aa8.56□□□□□ -1.04
LINC00240-204ENST00000607607 ITGAEP38570 1179 aa8.56□□□□□ -1.04
LINC00240-204ENST00000607607 RBM19Q9Y4C8 960 aaKnown RBP8.55□□□□□ -1.04
LINC00240-204ENST00000607607 RTN4Q9NQC3 1192 aaKnown RBP8.53□□□□□ -1.04
LINC00240-204ENST00000607607 ZNF316A6NFI3 1004 aaPredicted RBP8.51□□□□□ -1.05
LINC00240-204ENST00000607607 IL27Q8NEV9 243 aa8.5□□□□□ -1.05
LINC00240-204ENST00000607607 DEKP35659 375 aaKnown RBP8.47□□□□□ -1.05
LINC00240-204ENST00000607607 UBE2Q2Q8WVN8 375 aa8.44□□□□□ -1.06
LINC00240-204ENST00000607607 FKBP8Q14318 412 aa8.39□□□□□ -1.07
LINC00240-204ENST00000607607 NBR1Q14596 966 aa8.37□□□□□ -1.07
LINC00240-204ENST00000607607 PAK3O75914 559 aaPredicted RBP8.34□□□□□ -1.07
LINC00240-204ENST00000607607 AEBP2Q6ZN18 517 aaPredicted RBP8.32□□□□□ -1.08
LINC00240-204ENST00000607607 IRX6P78412 446 aaPredicted RBP8.31□□□□□ -1.08
LINC00240-204ENST00000607607 TIMELESSQ9UNS1 1208 aa8.29□□□□□ -1.08
LINC00240-204ENST00000607607 PKNOX2Q96KN3 472 aa8.29□□□□□ -1.08
LINC00240-204ENST00000607607 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
LINC00240-204ENST00000607607 EIF5BO60841 1220 aaKnown RBP8.28□□□□□ -1.08
LINC00240-204ENST00000607607 TRIM52Q96A61 297 aa8.21□□□□□ -1.1
LINC00240-204ENST00000607607 HNRNPUL2Q1KMD3 747 aaKnown RBP8.2□□□□□ -1.1
LINC00240-204ENST00000607607 FANCIQ9NVI1 1328 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 BRPF3Q9ULD4 1205 aa8.18□□□□□ -1.1
LINC00240-204ENST00000607607 ZMYND15Q9H091 742 aa8.12□□□□□ -1.11
LINC00240-204ENST00000607607 HIRIP3Q9BW71 556 aaPredicted RBP8.12□□□□□ -1.11
LINC00240-204ENST00000607607 SLC24A1O60721 1099 aa8.11□□□□□ -1.11
LINC00240-204ENST00000607607 DCAF8L2P0C7V8 631 aa8.11□□□□□ -1.11
LINC00240-204ENST00000607607 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
LINC00240-204ENST00000607607 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
LINC00240-204ENST00000607607 CLSPNQ9HAW4 1339 aa8.08□□□□□ -1.12
LINC00240-204ENST00000607607 ERICH6BQ5W0A0 696 aa8.08□□□□□ -1.12
LINC00240-204ENST00000607607 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
LINC00240-204ENST00000607607 NOP58Q9Y2X3 529 aaKnown RBP8.06□□□□□ -1.12
LINC00240-204ENST00000607607 B4GALNT3Q6L9W6 998 aa8.06□□□□□ -1.12
LINC00240-204ENST00000607607 SIN3AQ96ST3 1273 aa8.05□□□□□ -1.12
LINC00240-204ENST00000607607 VSIG10Q8N0Z9 540 aa8.04□□□□□ -1.12
LINC00240-204ENST00000607607 RB1CC1Q8TDY2 1594 aa8.04□□□□□ -1.12
LINC00240-204ENST00000607607 LAS1LQ9Y4W2 734 aaKnown RBP8.04□□□□□ -1.12
LINC00240-204ENST00000607607 NACADO15069 1562 aa8.03□□□□□ -1.12
LINC00240-204ENST00000607607 DDX10Q13206 875 aaKnown RBP8.03□□□□□ -1.12
LINC00240-204ENST00000607607 SENP3-EIF4A1A0A087X0R7 540 aa8.01□□□□□ -1.13
LINC00240-204ENST00000607607 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
LINC00240-204ENST00000607607 CDK11AQ9UQ88 783 aaPredicted RBP7.99□□□□□ -1.13
LINC00240-204ENST00000607607 WASHC2AQ641Q2 1341 aa7.99□□□□□ -1.13
LINC00240-204ENST00000607607 SKAP1Q86WV1 359 aa7.96□□□□□ -1.14
LINC00240-204ENST00000607607 DHX57Q6P158 1386 aaKnown RBP7.95□□□□□ -1.14
LINC00240-204ENST00000607607 CCDC184Q52MB2 194 aa7.95□□□□□ -1.14
LINC00240-204ENST00000607607 NEFLP07196 543 aa7.94□□□□□ -1.14
LINC00240-204ENST00000607607 RBM10P98175 930 aaKnown RBP7.94□□□□□ -1.14
LINC00240-204ENST00000607607 CEP162Q5TB80 1403 aa7.94□□□□□ -1.14
LINC00240-204ENST00000607607 WASHC2CQ9Y4E1 1318 aa7.93□□□□□ -1.14
LINC00240-204ENST00000607607 NEFMP07197 916 aa7.92□□□□□ -1.14
LINC00240-204ENST00000607607 ABCC8Q09428 1581 aa7.92□□□□□ -1.14
LINC00240-204ENST00000607607 BCL11BQ9C0K0 894 aaPredicted RBP7.92□□□□□ -1.14
LINC00240-204ENST00000607607 NPM2Q86SE8 214 aaKnown RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 RRAGDQ9NQL2 400 aaPredicted RBP7.91□□□□□ -1.14
LINC00240-204ENST00000607607 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms