RNA–Protein interactions for RNA: ENST00000517983.1

AP003354.2-201, humanhuman

TSL 4 BASIC

Gene AP003354.2, Length 563 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003354.2-201ENST00000517983 AEBP2Q6ZN18 517 aaPredicted RBP20.88■□□□□ 0.93
AP003354.2-201ENST00000517983 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
AP003354.2-201ENST00000517983 SENP3Q9H4L4 574 aaPredicted RBP17.7■□□□□ 0.42
AP003354.2-201ENST00000517983 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
AP003354.2-201ENST00000517983 POTEDQ86YR6 584 aa16.58■□□□□ 0.24
AP003354.2-201ENST00000517983 FOXD1Q16676 465 aa16.52■□□□□ 0.24
AP003354.2-201ENST00000517983 PLPPR3Q6T4P5 718 aa16.12■□□□□ 0.17
AP003354.2-201ENST00000517983 PPP6R1Q9UPN7 881 aa15.7■□□□□ 0.1
AP003354.2-201ENST00000517983 ADRA2BP18089 450 aa15.68■□□□□ 0.1
AP003354.2-201ENST00000517983 MSH5O43196 834 aa15.51■□□□□ 0.07
AP003354.2-201ENST00000517983 PIAS4Q8N2W9 510 aaPredicted RBP15.49■□□□□ 0.07
AP003354.2-201ENST00000517983 MAPK8IP2Q13387 824 aaPredicted RBP14.34□□□□□ -0.11
AP003354.2-201ENST00000517983 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
AP003354.2-201ENST00000517983 PPP4R3CPQ6ZMV5 832 aa14.21□□□□□ -0.13
AP003354.2-201ENST00000517983 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
AP003354.2-201ENST00000517983 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
AP003354.2-201ENST00000517983 NCBP3Q53F19 620 aaKnown RBP13.72□□□□□ -0.21
AP003354.2-201ENST00000517983 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
AP003354.2-201ENST00000517983 HOXD11P31277 338 aaPredicted RBP13.66□□□□□ -0.22
AP003354.2-201ENST00000517983 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
AP003354.2-201ENST00000517983 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
AP003354.2-201ENST00000517983 KCNA4P22459 653 aa13.56□□□□□ -0.24
AP003354.2-201ENST00000517983 NPM3O75607 178 aaKnown RBP13.55□□□□□ -0.24
AP003354.2-201ENST00000517983 RNF39Q9H2S5 420 aa13.19□□□□□ -0.3
AP003354.2-201ENST00000517983 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.08□□□□□ -0.32
AP003354.2-201ENST00000517983 DNAJC5BQ9UF47 199 aa13.08□□□□□ -0.32
AP003354.2-201ENST00000517983 C1QBPQ07021 282 aaKnown RBP13□□□□□ -0.33
AP003354.2-201ENST00000517983 SLC4A2P04920 1241 aa12.88□□□□□ -0.35
AP003354.2-201ENST00000517983 SLC4A1APQ9BWU0 796 aaKnown RBP12.84□□□□□ -0.35
AP003354.2-201ENST00000517983 POTEHQ6S545 545 aa12.81□□□□□ -0.36
AP003354.2-201ENST00000517983 U3KPZ7 1027 aaPredicted RBP12.81□□□□□ -0.36
AP003354.2-201ENST00000517983 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
AP003354.2-201ENST00000517983 CAPN15O75808 1086 aa12.55□□□□□ -0.4
AP003354.2-201ENST00000517983 FOXD4L1Q9NU39 408 aa12.51□□□□□ -0.41
AP003354.2-201ENST00000517983 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 HNRNPUL2Q1KMD3 747 aaKnown RBP12.48□□□□□ -0.41
AP003354.2-201ENST00000517983 ZBTB22O15209 634 aa12.46□□□□□ -0.41
AP003354.2-201ENST00000517983 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
AP003354.2-201ENST00000517983 SAMD1Q6SPF0 538 aaPredicted RBP12.44□□□□□ -0.42
AP003354.2-201ENST00000517983 TRHP20396 242 aaPredicted RBP12.43□□□□□ -0.42
AP003354.2-201ENST00000517983 APLP2Q06481 763 aa12.42□□□□□ -0.42
AP003354.2-201ENST00000517983 DSG3P32926 999 aa12.38□□□□□ -0.43
AP003354.2-201ENST00000517983 ZNF219Q9P2Y4 722 aaPredicted RBP12.33□□□□□ -0.44
AP003354.2-201ENST00000517983 ABCB7O75027 752 aa12.3□□□□□ -0.44
AP003354.2-201ENST00000517983 ATF5Q9Y2D1 282 aaPredicted RBP12.26□□□□□ -0.45
AP003354.2-201ENST00000517983 CSRNP3Q8WYN3 585 aa12.15□□□□□ -0.46
AP003354.2-201ENST00000517983 POLA2Q14181 598 aa12.14□□□□□ -0.47
AP003354.2-201ENST00000517983 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
AP003354.2-201ENST00000517983 ZBTB12Q9Y330 459 aaPredicted RBP11.82□□□□□ -0.52
AP003354.2-201ENST00000517983 RBM42Q9BTD8 480 aaKnown RBP11.75□□□□□ -0.53
AP003354.2-201ENST00000517983 OSCARQ8IYS5 282 aa11.72□□□□□ -0.53
AP003354.2-201ENST00000517983 FBLN2P98095 1184 aa11.7□□□□□ -0.54
AP003354.2-201ENST00000517983 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
AP003354.2-201ENST00000517983 AKT1S1Q96B36 256 aa11.57□□□□□ -0.56
AP003354.2-201ENST00000517983 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
AP003354.2-201ENST00000517983 SP7Q8TDD2 431 aaPredicted RBP11.53□□□□□ -0.56
AP003354.2-201ENST00000517983 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
AP003354.2-201ENST00000517983 REM2Q8IYK8 340 aaPredicted RBP11.49□□□□□ -0.57
AP003354.2-201ENST00000517983 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
AP003354.2-201ENST00000517983 SSUH2Q9Y2M2 353 aa11.38□□□□□ -0.59
AP003354.2-201ENST00000517983 PITPNM1O00562 1244 aa11.36□□□□□ -0.59
AP003354.2-201ENST00000517983 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
AP003354.2-201ENST00000517983 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
AP003354.2-201ENST00000517983 SPDYE4A6NLX3 237 aa11.26□□□□□ -0.61
AP003354.2-201ENST00000517983 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
AP003354.2-201ENST00000517983 PIP4P2Q8N4L2 257 aa11.24□□□□□ -0.61
AP003354.2-201ENST00000517983 FXR2P51116 673 aaKnown RBP eCLIP11.18□□□□□ -0.62
AP003354.2-201ENST00000517983 PRR29P0C7W0 189 aa11.12□□□□□ -0.63
AP003354.2-201ENST00000517983 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
AP003354.2-201ENST00000517983 CHADLQ6NUI6 762 aa11.06□□□□□ -0.64
AP003354.2-201ENST00000517983 HAX1O00165 279 aa11.02□□□□□ -0.65
AP003354.2-201ENST00000517983 FKBP8Q14318 412 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 STAG3Q9UJ98 1225 aa11.01□□□□□ -0.65
AP003354.2-201ENST00000517983 PROM2Q8N271 834 aa10.97□□□□□ -0.65
AP003354.2-201ENST00000517983 EVX2Q03828 476 aa10.9□□□□□ -0.66
AP003354.2-201ENST00000517983 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
AP003354.2-201ENST00000517983 FARP1Q9Y4F1 1045 aaPredicted RBP10.87□□□□□ -0.67
AP003354.2-201ENST00000517983 C19orf67A6NJJ6 358 aa10.82□□□□□ -0.68
AP003354.2-201ENST00000517983 LHX8Q68G74 356 aa10.8□□□□□ -0.68
AP003354.2-201ENST00000517983 MIER1Q8N108 512 aa10.75□□□□□ -0.69
AP003354.2-201ENST00000517983 CD44P16070 742 aaKnown RBP10.74□□□□□ -0.69
AP003354.2-201ENST00000517983 MNX1P50219 401 aaPredicted RBP10.73□□□□□ -0.69
AP003354.2-201ENST00000517983 SLC24A1O60721 1099 aa10.7□□□□□ -0.7
AP003354.2-201ENST00000517983 AMER1Q5JTC6 1135 aaPredicted RBP10.7□□□□□ -0.7
AP003354.2-201ENST00000517983 NPM1P06748 294 aaKnown RBP eCLIP10.68□□□□□ -0.7
AP003354.2-201ENST00000517983 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
AP003354.2-201ENST00000517983 PLEKHG5O94827 1062 aa10.65□□□□□ -0.7
AP003354.2-201ENST00000517983 ZRANB1Q9UGI0 708 aa10.65□□□□□ -0.7
AP003354.2-201ENST00000517983 GABBR2O75899 941 aa10.64□□□□□ -0.71
AP003354.2-201ENST00000517983 FBXO3Q9UK99 471 aa10.63□□□□□ -0.71
AP003354.2-201ENST00000517983 RTN4Q9NQC3 1192 aaKnown RBP10.62□□□□□ -0.71
AP003354.2-201ENST00000517983 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
AP003354.2-201ENST00000517983 TSPYL2Q9H2G4 693 aaPredicted RBP10.57□□□□□ -0.72
AP003354.2-201ENST00000517983 ZNF579Q8NAF0 562 aaKnown RBP10.54□□□□□ -0.72
AP003354.2-201ENST00000517983 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
AP003354.2-201ENST00000517983 VASPP50552 380 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms