RNA–Protein interactions for RNA: ENST00000502291.1

LINC02499-201, Transcript of long intergenic non-protein coding RNA 2499, humanhuman

TSL 3 BASIC

Gene LINC02499, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02499-201ENST00000502291 AEBP2Q6ZN18 517 aaPredicted RBP28.95■■■□□ 2.22
LINC02499-201ENST00000502291 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
LINC02499-201ENST00000502291 SENP3Q9H4L4 574 aaPredicted RBP24.66■■□□□ 1.54
LINC02499-201ENST00000502291 PHF23Q9BUL5 403 aaPredicted RBP24.34■■□□□ 1.49
LINC02499-201ENST00000502291 FOXD1Q16676 465 aa23.08■■□□□ 1.29
LINC02499-201ENST00000502291 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
LINC02499-201ENST00000502291 MSH5O43196 834 aa21.67■■□□□ 1.06
LINC02499-201ENST00000502291 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
LINC02499-201ENST00000502291 PIAS4Q8N2W9 510 aaPredicted RBP21.44■■□□□ 1.02
LINC02499-201ENST00000502291 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
LINC02499-201ENST00000502291 ADRA2BP18089 450 aa21.24■□□□□ 0.99
LINC02499-201ENST00000502291 MAPK8IP2Q13387 824 aaPredicted RBP19.63■□□□□ 0.73
LINC02499-201ENST00000502291 DMRT2Q9Y5R5 561 aa19.53■□□□□ 0.72
LINC02499-201ENST00000502291 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
LINC02499-201ENST00000502291 PPP4R3CPQ6ZMV5 832 aa18.81■□□□□ 0.6
LINC02499-201ENST00000502291 CACNB1Q02641 598 aaPredicted RBP18.79■□□□□ 0.6
LINC02499-201ENST00000502291 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
LINC02499-201ENST00000502291 HOXD11P31277 338 aaPredicted RBP18.69■□□□□ 0.58
LINC02499-201ENST00000502291 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
LINC02499-201ENST00000502291 RNF39Q9H2S5 420 aa18.5■□□□□ 0.55
LINC02499-201ENST00000502291 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
LINC02499-201ENST00000502291 C1QBPQ07021 282 aaKnown RBP18.18■□□□□ 0.5
LINC02499-201ENST00000502291 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
LINC02499-201ENST00000502291 NCBP3Q53F19 620 aaKnown RBP17.92■□□□□ 0.46
LINC02499-201ENST00000502291 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
LINC02499-201ENST00000502291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
LINC02499-201ENST00000502291 U3KPZ7 1027 aaPredicted RBP17.41■□□□□ 0.38
LINC02499-201ENST00000502291 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
LINC02499-201ENST00000502291 DSG3P32926 999 aa17.22■□□□□ 0.35
LINC02499-201ENST00000502291 CAPN15O75808 1086 aa17.18■□□□□ 0.34
LINC02499-201ENST00000502291 KCNA4P22459 653 aa17.12■□□□□ 0.33
LINC02499-201ENST00000502291 SLC4A2P04920 1241 aa17.06■□□□□ 0.32
LINC02499-201ENST00000502291 POTEHQ6S545 545 aa16.98■□□□□ 0.31
LINC02499-201ENST00000502291 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
LINC02499-201ENST00000502291 ABCB7O75027 752 aa16.79■□□□□ 0.28
LINC02499-201ENST00000502291 ZNF219Q9P2Y4 722 aaPredicted RBP16.78■□□□□ 0.28
LINC02499-201ENST00000502291 APLP2Q06481 763 aa16.76■□□□□ 0.27
LINC02499-201ENST00000502291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
LINC02499-201ENST00000502291 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
LINC02499-201ENST00000502291 SAMD1Q6SPF0 538 aaPredicted RBP16.61■□□□□ 0.25
LINC02499-201ENST00000502291 MYCNP04198 464 aaPredicted RBP16.38■□□□□ 0.21
LINC02499-201ENST00000502291 RBM42Q9BTD8 480 aaKnown RBP16.36■□□□□ 0.21
LINC02499-201ENST00000502291 POLA2Q14181 598 aa16.33■□□□□ 0.2
LINC02499-201ENST00000502291 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
LINC02499-201ENST00000502291 ATF5Q9Y2D1 282 aaPredicted RBP16.1■□□□□ 0.17
LINC02499-201ENST00000502291 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
LINC02499-201ENST00000502291 FOXD4L1Q9NU39 408 aa16.03■□□□□ 0.16
LINC02499-201ENST00000502291 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
LINC02499-201ENST00000502291 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
LINC02499-201ENST00000502291 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
LINC02499-201ENST00000502291 OSCARQ8IYS5 282 aa15.82■□□□□ 0.12
LINC02499-201ENST00000502291 ZBTB22O15209 634 aa15.76■□□□□ 0.11
LINC02499-201ENST00000502291 SP7Q8TDD2 431 aaPredicted RBP15.75■□□□□ 0.11
LINC02499-201ENST00000502291 PIP4P2Q8N4L2 257 aa15.74■□□□□ 0.11
LINC02499-201ENST00000502291 PITPNM1O00562 1244 aa15.66■□□□□ 0.1
LINC02499-201ENST00000502291 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
LINC02499-201ENST00000502291 ATXN8OSP0DMR3 200 aa15.56■□□□□ 0.08
LINC02499-201ENST00000502291 HAX1O00165 279 aa15.51■□□□□ 0.07
LINC02499-201ENST00000502291 SPDYE2BA6NHP3 402 aa15.43■□□□□ 0.06
LINC02499-201ENST00000502291 SPDYE6P0CI01 402 aa15.43■□□□□ 0.06
LINC02499-201ENST00000502291 SPDYE2Q495Y8 402 aa15.43■□□□□ 0.06
LINC02499-201ENST00000502291 FBLN2P98095 1184 aa15.38■□□□□ 0.05
LINC02499-201ENST00000502291 EVX2Q03828 476 aa15.38■□□□□ 0.05
LINC02499-201ENST00000502291 MKRN4PQ13434 485 aaPredicted RBP15.34■□□□□ 0.05
LINC02499-201ENST00000502291 PRKAR2AP13861 404 aaKnown RBP15.24■□□□□ 0.03
LINC02499-201ENST00000502291 SPDYE1Q8NFV5 336 aaPredicted RBP15.23■□□□□ 0.03
LINC02499-201ENST00000502291 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
LINC02499-201ENST00000502291 SSUH2Q9Y2M2 353 aa15.22■□□□□ 0.03
LINC02499-201ENST00000502291 ZNF692Q9BU19 519 aaPredicted RBP15.19■□□□□ 0.02
LINC02499-201ENST00000502291 C19orf67A6NJJ6 358 aa15.11■□□□□ 0.01
LINC02499-201ENST00000502291 CHADLQ6NUI6 762 aa15.02■□□□□ -0
LINC02499-201ENST00000502291 GABBR2O75899 941 aa14.97□□□□□ -0.01
LINC02499-201ENST00000502291 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
LINC02499-201ENST00000502291 PRR29P0C7W0 189 aa14.93□□□□□ -0.02
LINC02499-201ENST00000502291 LHX8Q68G74 356 aa14.77□□□□□ -0.05
LINC02499-201ENST00000502291 FARP1Q9Y4F1 1045 aaPredicted RBP14.75□□□□□ -0.05
LINC02499-201ENST00000502291 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
LINC02499-201ENST00000502291 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
LINC02499-201ENST00000502291 POTEIP0CG38 1075 aa14.7□□□□□ -0.06
LINC02499-201ENST00000502291 CLCN6P51797 869 aa14.56□□□□□ -0.08
LINC02499-201ENST00000502291 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
LINC02499-201ENST00000502291 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
LINC02499-201ENST00000502291 ZNF579Q8NAF0 562 aaKnown RBP14.49□□□□□ -0.09
LINC02499-201ENST00000502291 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
LINC02499-201ENST00000502291 DCBLD2Q96PD2 775 aa14.44□□□□□ -0.1
LINC02499-201ENST00000502291 STAG3Q9UJ98 1225 aa14.44□□□□□ -0.1
LINC02499-201ENST00000502291 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
LINC02499-201ENST00000502291 GALR2O43603 387 aaPredicted RBP14.37□□□□□ -0.11
LINC02499-201ENST00000502291 MNX1P50219 401 aaPredicted RBP14.27□□□□□ -0.13
LINC02499-201ENST00000502291 PHF12Q96QT6 1004 aa14.26□□□□□ -0.13
LINC02499-201ENST00000502291 PAK3O75914 559 aaPredicted RBP14.22□□□□□ -0.13
LINC02499-201ENST00000502291 POTEB2H3BUK9 544 aa14.21□□□□□ -0.13
LINC02499-201ENST00000502291 OTUD5Q96G74 571 aa14.2□□□□□ -0.14
LINC02499-201ENST00000502291 NPM1P06748 294 aaKnown RBP eCLIP14.18□□□□□ -0.14
LINC02499-201ENST00000502291 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
LINC02499-201ENST00000502291 MS4A3Q96HJ5 214 aa14.06□□□□□ -0.16
LINC02499-201ENST00000502291 PLSCR2Q9NRY7 297 aa14.05□□□□□ -0.16
LINC02499-201ENST00000502291 ASTLQ6HA08 431 aaPredicted RBP14.03□□□□□ -0.16
LINC02499-201ENST00000502291 PROM2Q8N271 834 aa14.03□□□□□ -0.16
LINC02499-201ENST00000502291 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms