RNA–Protein interactions for RNA: ENST00000558175.1

LINC00687-203, long intergenic non-protein coding RNA 687, humanhuman

TSL 3 BASIC

Gene LINC00687, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00687-203ENST00000558175 AEBP2Q6ZN18 517 aaPredicted RBP25.07■■□□□ 1.6
LINC00687-203ENST00000558175 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
LINC00687-203ENST00000558175 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
LINC00687-203ENST00000558175 PHF23Q9BUL5 403 aaPredicted RBP21.23■□□□□ 0.99
LINC00687-203ENST00000558175 FOXD1Q16676 465 aa19.84■□□□□ 0.77
LINC00687-203ENST00000558175 PLPPR3Q6T4P5 718 aa19.45■□□□□ 0.7
LINC00687-203ENST00000558175 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
LINC00687-203ENST00000558175 ADRA2BP18089 450 aa18.85■□□□□ 0.61
LINC00687-203ENST00000558175 PIAS4Q8N2W9 510 aaPredicted RBP18.63■□□□□ 0.57
LINC00687-203ENST00000558175 MSH5O43196 834 aa18.36■□□□□ 0.53
LINC00687-203ENST00000558175 POTEDQ86YR6 584 aa17.33■□□□□ 0.36
LINC00687-203ENST00000558175 MAPK8IP2Q13387 824 aaPredicted RBP17.21■□□□□ 0.35
LINC00687-203ENST00000558175 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
LINC00687-203ENST00000558175 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
LINC00687-203ENST00000558175 DMRT2Q9Y5R5 561 aa16.94■□□□□ 0.3
LINC00687-203ENST00000558175 KCNA4P22459 653 aa16.8■□□□□ 0.28
LINC00687-203ENST00000558175 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
LINC00687-203ENST00000558175 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
LINC00687-203ENST00000558175 EHMT2Q96KQ7 1210 aa16.45■□□□□ 0.22
LINC00687-203ENST00000558175 HOXD11P31277 338 aaPredicted RBP16.44■□□□□ 0.22
LINC00687-203ENST00000558175 RNF216Q9NWF9 866 aaPredicted RBP16.43■□□□□ 0.22
LINC00687-203ENST00000558175 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
LINC00687-203ENST00000558175 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
LINC00687-203ENST00000558175 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
LINC00687-203ENST00000558175 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
LINC00687-203ENST00000558175 DNAJC5BQ9UF47 199 aa15.77■□□□□ 0.12
LINC00687-203ENST00000558175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.75■□□□□ 0.11
LINC00687-203ENST00000558175 RNF39Q9H2S5 420 aa15.72■□□□□ 0.11
LINC00687-203ENST00000558175 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
LINC00687-203ENST00000558175 SLC4A2P04920 1241 aa15.52■□□□□ 0.08
LINC00687-203ENST00000558175 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
LINC00687-203ENST00000558175 ZBTB22O15209 634 aa15.48■□□□□ 0.07
LINC00687-203ENST00000558175 U3KPZ7 1027 aaPredicted RBP15.42■□□□□ 0.06
LINC00687-203ENST00000558175 FOXD4L1Q9NU39 408 aa15.23■□□□□ 0.03
LINC00687-203ENST00000558175 SPINK5Q9NQ38 1064 aaPredicted RBP15.13■□□□□ 0.01
LINC00687-203ENST00000558175 CAPN15O75808 1086 aa15.09■□□□□ 0.01
LINC00687-203ENST00000558175 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
LINC00687-203ENST00000558175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.07■□□□□ 0
LINC00687-203ENST00000558175 HNRNPUL2Q1KMD3 747 aaKnown RBP15.07■□□□□ 0
LINC00687-203ENST00000558175 SAMD1Q6SPF0 538 aaPredicted RBP15.02■□□□□ -0
LINC00687-203ENST00000558175 APLP2Q06481 763 aa14.99□□□□□ -0.01
LINC00687-203ENST00000558175 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
LINC00687-203ENST00000558175 DSG3P32926 999 aa14.87□□□□□ -0.03
LINC00687-203ENST00000558175 ZNF219Q9P2Y4 722 aaPredicted RBP14.85□□□□□ -0.03
LINC00687-203ENST00000558175 ABCB7O75027 752 aa14.8□□□□□ -0.04
LINC00687-203ENST00000558175 ATF5Q9Y2D1 282 aaPredicted RBP14.77□□□□□ -0.05
LINC00687-203ENST00000558175 ATXN8OSP0DMR3 200 aa14.64□□□□□ -0.07
LINC00687-203ENST00000558175 POLA2Q14181 598 aa14.62□□□□□ -0.07
LINC00687-203ENST00000558175 FKBP8Q14318 412 aa14.37□□□□□ -0.11
LINC00687-203ENST00000558175 RTN4Q9NQC3 1192 aaKnown RBP14.31□□□□□ -0.12
LINC00687-203ENST00000558175 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
LINC00687-203ENST00000558175 ZBTB12Q9Y330 459 aaPredicted RBP14.27□□□□□ -0.13
LINC00687-203ENST00000558175 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
LINC00687-203ENST00000558175 FBLN2P98095 1184 aa14.13□□□□□ -0.15
LINC00687-203ENST00000558175 OSCARQ8IYS5 282 aa14.12□□□□□ -0.15
LINC00687-203ENST00000558175 MKRN4PQ13434 485 aaPredicted RBP14.08□□□□□ -0.16
LINC00687-203ENST00000558175 SLC24A1O60721 1099 aa14.04□□□□□ -0.16
LINC00687-203ENST00000558175 AKT1S1Q96B36 256 aa13.91□□□□□ -0.18
LINC00687-203ENST00000558175 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
LINC00687-203ENST00000558175 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
LINC00687-203ENST00000558175 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
LINC00687-203ENST00000558175 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
LINC00687-203ENST00000558175 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
LINC00687-203ENST00000558175 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
LINC00687-203ENST00000558175 SSUH2Q9Y2M2 353 aa13.72□□□□□ -0.21
LINC00687-203ENST00000558175 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
LINC00687-203ENST00000558175 PITPNM1O00562 1244 aa13.66□□□□□ -0.22
LINC00687-203ENST00000558175 POTEHQ6S545 545 aa13.66□□□□□ -0.22
LINC00687-203ENST00000558175 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINC00687-203ENST00000558175 FBXO3Q9UK99 471 aa13.64□□□□□ -0.23
LINC00687-203ENST00000558175 CLEC11AQ9Y240 323 aa13.6□□□□□ -0.23
LINC00687-203ENST00000558175 PROM2Q8N271 834 aa13.56□□□□□ -0.24
LINC00687-203ENST00000558175 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
LINC00687-203ENST00000558175 PIP4P2Q8N4L2 257 aa13.48□□□□□ -0.25
LINC00687-203ENST00000558175 VASPP50552 380 aaPredicted RBP13.44□□□□□ -0.26
LINC00687-203ENST00000558175 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC00687-203ENST00000558175 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
LINC00687-203ENST00000558175 IFNLR1Q8IU57 520 aaPredicted RBP13.35□□□□□ -0.27
LINC00687-203ENST00000558175 PRKAR2AP13861 404 aaKnown RBP13.33□□□□□ -0.28
LINC00687-203ENST00000558175 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
LINC00687-203ENST00000558175 STAG3Q9UJ98 1225 aa13.29□□□□□ -0.28
LINC00687-203ENST00000558175 HAX1O00165 279 aa13.19□□□□□ -0.3
LINC00687-203ENST00000558175 PLCB2Q00722 1185 aa13.19□□□□□ -0.3
LINC00687-203ENST00000558175 PKD2Q13563 968 aa13.17□□□□□ -0.3
LINC00687-203ENST00000558175 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
LINC00687-203ENST00000558175 CREBZFQ9NS37 354 aa13.12□□□□□ -0.31
LINC00687-203ENST00000558175 FARP1Q9Y4F1 1045 aaPredicted RBP13.09□□□□□ -0.31
LINC00687-203ENST00000558175 KLHL34Q8N239 644 aa13.07□□□□□ -0.32
LINC00687-203ENST00000558175 EVX2Q03828 476 aa13.05□□□□□ -0.32
LINC00687-203ENST00000558175 SPOCK2Q92563 424 aa13.05□□□□□ -0.32
LINC00687-203ENST00000558175 HAP1P54257 671 aaPredicted RBP13□□□□□ -0.33
LINC00687-203ENST00000558175 MIER1Q8N108 512 aa13□□□□□ -0.33
LINC00687-203ENST00000558175 C19orf67A6NJJ6 358 aa12.99□□□□□ -0.33
LINC00687-203ENST00000558175 SP7Q8TDD2 431 aaPredicted RBP12.97□□□□□ -0.33
LINC00687-203ENST00000558175 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
LINC00687-203ENST00000558175 ECM2O94769 699 aaPredicted RBP12.93□□□□□ -0.34
LINC00687-203ENST00000558175 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
LINC00687-203ENST00000558175 CD44P16070 742 aaKnown RBP12.92□□□□□ -0.34
LINC00687-203ENST00000558175 PLEKHG5O94827 1062 aa12.9□□□□□ -0.34
LINC00687-203ENST00000558175 NPM1P06748 294 aaKnown RBP eCLIP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms