Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FMN1-201ENST00000320930 3930 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 LCN2-201ENST00000277480 822 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 PIWIL3-201ENST00000332271 3504 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.316-201ENST00000365118 111 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORD115-35-201ENST00000365122 82 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-487P-201ENST00000365430 104 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CAP1-204ENST00000372798 1563 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL391903.1-201ENST00000407513 365 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.611-201ENST00000410682 108 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 Y_RNA.620-201ENST00000411009 88 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 Z83851.1-201ENST00000420096 545 ntTSL 4 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 SYS1-204ENST00000426004 2915 ntTSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC004941.2-201ENST00000427009 228 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC002511.1-201ENST00000428426 1000 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 MTND6P14-201ENST00000433044 522 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CDK5P1-201ENST00000442838 877 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 DDX39AP1-201ENST00000445147 1181 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RXFP1-207ENST00000470033 2175 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 NDUFS5P2-201ENST00000484004 306 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RPL23AP54-201ENST00000495129 419 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 PGAM1P9-201ENST00000503887 755 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC016632.1-201ENST00000503994 196 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 HMGN2P4-201ENST00000506772 381 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 PRR7-AS1-203ENST00000511565 502 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 HIGD1AP3-201ENST00000515857 278 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RNU6-830P-201ENST00000516353 107 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 SNORA31.22-201ENST00000517204 135 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AACSP1-202ENST00000521412 1095 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 MBP-227ENST00000526111 581 ntTSL 4 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CS-202ENST00000542324 1893 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC090022.1-201ENST00000546569 311 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 NUTF2P2-201ENST00000551207 384 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CD63-212ENST00000552067 621 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RBM4-213ENST00000578778 582 ntTSL 4 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL592211.1-201ENST00000594418 497 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC025754.2-201ENST00000606491 432 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL590999.1-202ENST00000607215 3053 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL356102.1-201ENST00000622876 272 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC112484.5-201ENST00000624189 228 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 UBR1-212ENST00000627960 189 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AL162726.3-218ENST00000636401 95 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01529-207ENST00000637448 810 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 NAA16-201ENST00000379406 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 INTS9-211ENST00000521022 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 IGSF9B-201ENST00000321016 4050 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 HM13-224ENST00000498035 3932 ntTSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 AC087762.2-201ENST00000639346 3773 ntBASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 FOXL2NB-201ENST00000383165 3538 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RNF182-204ENST00000488300 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 CDCA7-201ENST00000306721 2789 ntTSL 2 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 LILRB2-203ENST00000391748 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 NBPF12-201ENST00000439206 1831 ntTSL 5 BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
KRTAP3-3Q9BYR6 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZBED9-201ENST00000452236 4877 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SIGLEC10-202ENST00000353836 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ATP6V1C2-202ENST00000381661 3102 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC103988.1-201ENST00000566382 2177 ntBASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ZNF835-201ENST00000537055 3450 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 SEC16B-201ENST00000308284 3985 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 NOL10-202ENST00000381685 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 HSPA5-201ENST00000324460 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 LINC02145-202ENST00000507444 2419 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PCID2-216ENST00000622406 1937 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 DAB1-205ENST00000371236 5298 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 CCDC85C-207ENST00000557769 3793 ntTSL 2 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 PDXDC1-216ENST00000569715 3775 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.43□□□□□ -1.54
KRTAP3-3Q9BYR6 ADD1-217ENST00000513328 3107 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms