Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HLA-DRB4X5D2U9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PHGDH-210ENST00000641115 1638 ntBASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 AP001271.2-201ENST00000624018 1556 ntBASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DRB4X5D2U9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 PNMA6B-201ENST00000538162 1200 ntBASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DRB4X5D2U9 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 AC026471.1-201ENST00000564629 3026 ntBASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DRB4X5D2U9 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 AC009237.14-201ENST00000609975 1594 ntBASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
HLA-DRB4X5D2U9 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms