Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 AC097381.1-201ENST00000429019 1296 ntBASIC14.31□□□□□ -0.12
COX11Q9Y6N1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 MIR6821-201ENST00000617625 74 ntBASIC14.31□□□□□ -0.12
COX11Q9Y6N1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 TCF3P1-201ENST00000423021 1937 ntBASIC14.31□□□□□ -0.12
COX11Q9Y6N1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.31□□□□□ -0.12
COX11Q9Y6N1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COX11Q9Y6N1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 AC005224.4-201ENST00000583262 1652 ntBASIC14.3□□□□□ -0.12
COX11Q9Y6N1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MIR5787-201ENST00000611784 55 ntBASIC14.3□□□□□ -0.12
COX11Q9Y6N1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MIR6084-201ENST00000622012 110 ntBASIC14.3□□□□□ -0.12
COX11Q9Y6N1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.3□□□□□ -0.12
COX11Q9Y6N1 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COX11Q9Y6N1 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 AC009113.1-201ENST00000570267 2443 ntBASIC14.29□□□□□ -0.12
COX11Q9Y6N1 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 AC034268.1-201ENST00000441047 882 ntBASIC14.29□□□□□ -0.12
COX11Q9Y6N1 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COX11Q9Y6N1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms