Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 AC239809.2-201ENST00000415381 517 ntBASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 AC012618.2-201ENST00000428058 849 ntBASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 AC073912.3-201ENST00000624414 853 ntBASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.07■□□□□ 0.48
HRH3Q9Y5N1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 AL020996.1-203ENST00000536896 2307 ntBASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 AC211429.1-201ENST00000415277 523 ntBASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 TSPY15P-201ENST00000457163 923 ntBASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 KRT16P6-202ENST00000425692 1426 ntBASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.06■□□□□ 0.48
HRH3Q9Y5N1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 AL049637.2-201ENST00000641778 930 ntBASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 AC018553.1-201ENST00000616682 1458 ntBASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
HRH3Q9Y5N1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 AC116351.2-201ENST00000606540 1585 ntBASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms