Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHB1Q9Y5F3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 KRASP1-201ENST00000407852 552 ntBASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 AC120498.8-201ENST00000614275 531 ntBASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHB1Q9Y5F3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
PCDHB1Q9Y5F3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 AC087499.1-201ENST00000418141 1075 ntBASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHB1Q9Y5F3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AC116351.2-201ENST00000606540 1585 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 MIR4785-201ENST00000585005 73 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AP001412.1-201ENST00000608405 714 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AC110285.5-201ENST00000611501 352 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AC113410.3-201ENST00000623366 203 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 AC125437.2-201ENST00000625180 2167 ntBASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
PCDHB1Q9Y5F3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.56■□□□□ 0.72
PCDHB1Q9Y5F3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms