Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBE2D4Q9Y2X8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 BMP1-204ENST00000397814 836 ntTSL 4 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 AC007322.4-201ENST00000509611 723 ntBASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 MFSD11-216ENST00000590393 1141 ntBASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 AC100791.3-201ENST00000617619 330 ntBASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 AC105020.6-201ENST00000621523 1217 ntBASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBE2D4Q9Y2X8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 AC013268.1-206ENST00000638368 961 ntBASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 AC112229.1-201ENST00000639295 961 ntBASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBE2D4Q9Y2X8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 AL161938.1-201ENST00000569833 2180 ntBASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 KRT18P61-201ENST00000585825 1298 ntBASIC13.6□□□□□ -0.23
UBE2D4Q9Y2X8 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms