Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 Z99916.2-201ENST00000604037 246 ntBASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 AC009237.14-201ENST00000609975 1594 ntBASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GTF3C4Q9UKN8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.09■□□□□ 0.97
GTF3C4Q9UKN8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.08■□□□□ 0.97
GTF3C4Q9UKN8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GTF3C4Q9UKN8 TREX1-205ENST00000625293 1783 ntBASIC21.08■□□□□ 0.96
GTF3C4Q9UKN8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 NBPF21P-201ENST00000425093 1451 ntBASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
GTF3C4Q9UKN8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AL596275.1-201ENST00000423464 877 ntBASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
GTF3C4Q9UKN8 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
GTF3C4Q9UKN8 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms