Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.26■□□□□ 0.19
LIN7CQ9NUP9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 AC104771.1-201ENST00000603335 964 ntBASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 AL589743.5-201ENST00000616611 1050 ntBASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 PTBP1P-201ENST00000554374 1601 ntBASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 KRT8P20-201ENST00000423953 1409 ntBASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LIN7CQ9NUP9 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 KRT18P68-201ENST00000392293 1000 ntBASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 HLA-L-209ENST00000420110 1011 ntBASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 GUSBP6-202ENST00000438529 1198 ntBASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LIN7CQ9NUP9 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.23■□□□□ 0.19
LIN7CQ9NUP9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms