Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 AC116351.2-201ENST00000606540 1585 ntBASIC21.22■□□□□ 0.99
NLRC4Q9NPP4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NLRC4Q9NPP4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NLRC4Q9NPP4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.21■□□□□ 0.99
NLRC4Q9NPP4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.2■□□□□ 0.99
NLRC4Q9NPP4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.99
NLRC4Q9NPP4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
NLRC4Q9NPP4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.2■□□□□ 0.98
NLRC4Q9NPP4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 AC004408.2-201ENST00000623613 2777 ntBASIC21.19■□□□□ 0.98
NLRC4Q9NPP4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 AL390719.1-204ENST00000412397 1219 ntBASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 AC006557.6-201ENST00000623071 864 ntBASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 AC124283.5-201ENST00000624661 1809 ntBASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.18■□□□□ 0.98
NLRC4Q9NPP4 TNXA-203ENST00000507684 2038 ntBASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
NLRC4Q9NPP4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms