Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 AP001271.2-201ENST00000624018 1556 ntBASIC17.4■□□□□ 0.38
C12orf49Q9H741 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
C12orf49Q9H741 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.4■□□□□ 0.38
C12orf49Q9H741 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf49Q9H741 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf49Q9H741 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
C12orf49Q9H741 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
C12orf49Q9H741 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 AC113410.3-201ENST00000623366 203 ntBASIC17.39■□□□□ 0.37
C12orf49Q9H741 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
C12orf49Q9H741 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
C12orf49Q9H741 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 AL353807.1-201ENST00000427475 662 ntBASIC17.38■□□□□ 0.37
C12orf49Q9H741 TUBB8P6-201ENST00000436895 1288 ntBASIC17.38■□□□□ 0.37
C12orf49Q9H741 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
C12orf49Q9H741 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.38■□□□□ 0.37
C12orf49Q9H741 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 LINC01521-201ENST00000504184 1943 ntBASIC17.37■□□□□ 0.37
C12orf49Q9H741 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
C12orf49Q9H741 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.37■□□□□ 0.37
C12orf49Q9H741 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.37■□□□□ 0.37
C12orf49Q9H741 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms