Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRIM4Q9C037 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
TRIM4Q9C037 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 UBE2SP1-201ENST00000450587 669 ntBASIC19.44■□□□□ 0.7
TRIM4Q9C037 TERF1P5-201ENST00000477545 1207 ntBASIC19.44■□□□□ 0.7
TRIM4Q9C037 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 MIR4497-201ENST00000583208 89 ntBASIC19.44■□□□□ 0.7
TRIM4Q9C037 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 REXO1L12P-201ENST00000622156 912 ntBASIC19.44■□□□□ 0.7
TRIM4Q9C037 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 AC020916.1-201ENST00000587762 1774 ntBASIC19.44■□□□□ 0.7
TRIM4Q9C037 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
TRIM4Q9C037 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRIM4Q9C037 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 MIR718-201ENST00000390190 70 ntBASIC19.43■□□□□ 0.7
TRIM4Q9C037 AC026366.1-201ENST00000488803 879 ntBASIC19.43■□□□□ 0.7
TRIM4Q9C037 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 AC008175.2-201ENST00000612840 297 ntBASIC19.43■□□□□ 0.7
TRIM4Q9C037 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 AL359736.2-201ENST00000621992 437 ntBASIC19.43■□□□□ 0.7
TRIM4Q9C037 OR10C1-204ENST00000622521 1039 ntBASIC19.43■□□□□ 0.7
TRIM4Q9C037 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRIM4Q9C037 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TRIM4Q9C037 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 KRT16P2-201ENST00000414673 1423 ntBASIC19.42■□□□□ 0.7
TRIM4Q9C037 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM4Q9C037 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TRIM4Q9C037 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms