Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AL032819.2-201ENST00000624543 2162 ntBASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 HES6-206ENST00000409574 738 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AK3-203ENST00000447596 705 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 HSD17B1P1-201ENST00000590052 955 ntBASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SMUG1P1-201ENST00000590640 811 ntBASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 DPP3P2-201ENST00000416030 1696 ntBASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC5.28□□□□□ -1.56
LCE3DQ9BYE3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 AC018470.1-201ENST00000624790 3129 ntBASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
LCE3DQ9BYE3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms