Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CALR3Q96L12 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.7■□□□□ 0.9
CALR3Q96L12 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.7■□□□□ 0.9
CALR3Q96L12 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CALR3Q96L12 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.69■□□□□ 0.9
CALR3Q96L12 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.69■□□□□ 0.9
CALR3Q96L12 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.69■□□□□ 0.9
CALR3Q96L12 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.69■□□□□ 0.9
CALR3Q96L12 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.69■□□□□ 0.9
CALR3Q96L12 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.69■□□□□ 0.9
CALR3Q96L12 LSM12P1-201ENST00000411836 588 ntBASIC20.69■□□□□ 0.9
CALR3Q96L12 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CALR3Q96L12 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.69■□□□□ 0.9
CALR3Q96L12 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.69■□□□□ 0.9
CALR3Q96L12 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CALR3Q96L12 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CALR3Q96L12 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.69■□□□□ 0.9
CALR3Q96L12 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CALR3Q96L12 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.68■□□□□ 0.9
CALR3Q96L12 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CALR3Q96L12 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CALR3Q96L12 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CALR3Q96L12 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.67■□□□□ 0.9
CALR3Q96L12 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.67■□□□□ 0.9
CALR3Q96L12 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 GPX1P1-201ENST00000388829 606 ntBASIC20.67■□□□□ 0.9
CALR3Q96L12 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CALR3Q96L12 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 AC005181.1-201ENST00000604782 1256 ntBASIC20.67■□□□□ 0.9
CALR3Q96L12 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CALR3Q96L12 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
CALR3Q96L12 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.67■□□□□ 0.9
CALR3Q96L12 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 TFP1-202ENST00000475455 1573 ntBASIC20.67■□□□□ 0.9
CALR3Q96L12 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CALR3Q96L12 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CALR3Q96L12 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CALR3Q96L12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CALR3Q96L12 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.66■□□□□ 0.9
CALR3Q96L12 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.66■□□□□ 0.9
CALR3Q96L12 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CALR3Q96L12 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.66■□□□□ 0.9
CALR3Q96L12 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CALR3Q96L12 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms