Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.15■□□□□ 0.66
PDLIM5Q96HC4 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
PDLIM5Q96HC4 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PDLIM5Q96HC4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 POM121L13P-201ENST00000422362 380 ntBASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 KRT18P16-201ENST00000510337 1294 ntBASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 KRT8P8-201ENST00000434750 1448 ntBASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PDLIM5Q96HC4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 AC008403.3-201ENST00000598924 454 ntBASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
PDLIM5Q96HC4 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ZNF815P-204ENST00000434898 1737 ntBASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PDLIM5Q96HC4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms