Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC47A1Q96FL8 CYP21A1P-202ENST00000354927 1481 ntBASIC18.45■□□□□ 0.54
SLC47A1Q96FL8 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC47A1Q96FL8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SLC47A1Q96FL8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC47A1Q96FL8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 AC006015.1-201ENST00000429970 570 ntBASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 AC016405.3-201ENST00000607710 860 ntBASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SLC47A1Q96FL8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 DUX4L16-201ENST00000555130 1264 ntBASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 AC011767.1-201ENST00000617410 1153 ntBASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC47A1Q96FL8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 AL031963.3-201ENST00000606441 850 ntBASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.42■□□□□ 0.54
SLC47A1Q96FL8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SLC47A1Q96FL8 AL162430.1-201ENST00000480705 870 ntBASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms