Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
FOXRED1Q96CU9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 PHGDH-210ENST00000641115 1638 ntBASIC17■□□□□ 0.31
FOXRED1Q96CU9 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 MFSD11-216ENST00000590393 1141 ntBASIC17■□□□□ 0.31
FOXRED1Q96CU9 AC011767.1-201ENST00000617410 1153 ntBASIC17■□□□□ 0.31
FOXRED1Q96CU9 AC013268.1-206ENST00000638368 961 ntBASIC17■□□□□ 0.31
FOXRED1Q96CU9 AC112229.1-201ENST00000639295 961 ntBASIC17■□□□□ 0.31
FOXRED1Q96CU9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17■□□□□ 0.31
FOXRED1Q96CU9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17■□□□□ 0.31
FOXRED1Q96CU9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC093503.3-201ENST00000624917 2352 ntBASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC080038.1-201ENST00000611274 1154 ntBASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 AC090340.1-201ENST00000620778 4980 ntBASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
FOXRED1Q96CU9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.98■□□□□ 0.31
FOXRED1Q96CU9 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms