Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 AL031963.3-201ENST00000606441 850 ntBASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB3IL1Q8TBN0 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RAB3IL1Q8TBN0 CYP21A1P-202ENST00000354927 1481 ntBASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 AC026271.2-201ENST00000428091 497 ntBASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 KRT8P20-201ENST00000423953 1409 ntBASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RAB3IL1Q8TBN0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 AC120498.9-201ENST00000339021 3867 ntBASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB3IL1Q8TBN0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RAB3IL1Q8TBN0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms