Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TTC16Q8NEE8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TTC16Q8NEE8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 AC073195.1-201ENST00000607241 877 ntBASIC20.54■□□□□ 0.88
TTC16Q8NEE8 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.54■□□□□ 0.88
TTC16Q8NEE8 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 AL391422.3-201ENST00000603791 2761 ntBASIC20.54■□□□□ 0.88
TTC16Q8NEE8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TTC16Q8NEE8 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TTC16Q8NEE8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TTC16Q8NEE8 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
TTC16Q8NEE8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms