Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 EEF1DP3-203ENST00000566025 782 ntBASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 AC053503.5-201ENST00000601508 636 ntBASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LYSMD2Q8IV50 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 AC124067.4-201ENST00000519691 2379 ntBASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 GUSBP5-201ENST00000418136 578 ntBASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.17■□□□□ 0.34
LYSMD2Q8IV50 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
LYSMD2Q8IV50 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 Z98044.1-201ENST00000632503 1764 ntBASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC17.15■□□□□ 0.34
LYSMD2Q8IV50 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms