Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.64■□□□□ 0.73
PACS2Q86VP3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 AC005224.4-201ENST00000583262 1652 ntBASIC19.63■□□□□ 0.73
PACS2Q86VP3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 AC084018.2-201ENST00000613093 2607 ntBASIC19.63■□□□□ 0.73
PACS2Q86VP3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PACS2Q86VP3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PACS2Q86VP3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 AC046158.3-201ENST00000624947 2558 ntBASIC19.62■□□□□ 0.73
PACS2Q86VP3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.62■□□□□ 0.73
PACS2Q86VP3 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 AC012183.1-201ENST00000625197 499 ntBASIC19.62■□□□□ 0.73
PACS2Q86VP3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PACS2Q86VP3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PACS2Q86VP3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 AC090164.3-201ENST00000610780 2143 ntBASIC19.61■□□□□ 0.73
PACS2Q86VP3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PACS2Q86VP3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PACS2Q86VP3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PACS2Q86VP3 AC079140.4-201ENST00000507448 529 ntBASIC19.6■□□□□ 0.73
PACS2Q86VP3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 NTF6G-201ENST00000591094 616 ntBASIC19.6■□□□□ 0.73
PACS2Q86VP3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PACS2Q86VP3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms