Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.09■□□□□ 0.81
ITGA8P53708 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.09■□□□□ 0.81
ITGA8P53708 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.09■□□□□ 0.81
ITGA8P53708 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.09■□□□□ 0.81
ITGA8P53708 C2orf69P4-201ENST00000565394 541 ntBASIC20.09■□□□□ 0.81
ITGA8P53708 AC069236.1-201ENST00000604339 616 ntBASIC20.09■□□□□ 0.81
ITGA8P53708 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
ITGA8P53708 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ITGA8P53708 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.09■□□□□ 0.81
ITGA8P53708 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.09■□□□□ 0.81
ITGA8P53708 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ITGA8P53708 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.08■□□□□ 0.81
ITGA8P53708 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC20.08■□□□□ 0.81
ITGA8P53708 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ITGA8P53708 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.08■□□□□ 0.81
ITGA8P53708 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.08■□□□□ 0.81
ITGA8P53708 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ITGA8P53708 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.08■□□□□ 0.81
ITGA8P53708 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ITGA8P53708 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
ITGA8P53708 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.07■□□□□ 0.8
ITGA8P53708 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 AC016769.1-201ENST00000409132 1010 ntBASIC20.07■□□□□ 0.8
ITGA8P53708 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.07■□□□□ 0.8
ITGA8P53708 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.07■□□□□ 0.8
ITGA8P53708 AL589743.5-201ENST00000616611 1050 ntBASIC20.07■□□□□ 0.8
ITGA8P53708 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ITGA8P53708 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ITGA8P53708 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGA8P53708 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.06■□□□□ 0.8
ITGA8P53708 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.06■□□□□ 0.8
ITGA8P53708 KRT18P5-201ENST00000436075 1291 ntBASIC20.06■□□□□ 0.8
ITGA8P53708 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGA8P53708 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.06■□□□□ 0.8
ITGA8P53708 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 AC008694.1-202ENST00000636953 945 ntBASIC20.06■□□□□ 0.8
ITGA8P53708 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.06■□□□□ 0.8
ITGA8P53708 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGA8P53708 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ITGA8P53708 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.06■□□□□ 0.8
ITGA8P53708 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 AC018553.1-201ENST00000616682 1458 ntBASIC20.05■□□□□ 0.8
ITGA8P53708 AL161938.1-201ENST00000569833 2180 ntBASIC20.05■□□□□ 0.8
ITGA8P53708 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGA8P53708 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.05■□□□□ 0.8
ITGA8P53708 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 AC010980.2-201ENST00000587099 1412 ntBASIC20.05■□□□□ 0.8
ITGA8P53708 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 AL138781.2-201ENST00000617896 1843 ntBASIC20.05■□□□□ 0.8
ITGA8P53708 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ITGA8P53708 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.05■□□□□ 0.8
ITGA8P53708 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGA8P53708 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.05■□□□□ 0.8
ITGA8P53708 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
ITGA8P53708 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
ITGA8P53708 KRT17P1-201ENST00000399211 1546 ntBASIC20.05■□□□□ 0.8
ITGA8P53708 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ITGA8P53708 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms