Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
PCP4P48539 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
PCP4P48539 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.59□□□□□ -0.23
PCP4P48539 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
PCP4P48539 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.59□□□□□ -0.23
PCP4P48539 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
PCP4P48539 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.59□□□□□ -0.23
PCP4P48539 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 NKILA-202ENST00000614771 2598 ntBASIC13.59□□□□□ -0.23
PCP4P48539 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC13.59□□□□□ -0.23
PCP4P48539 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.59□□□□□ -0.23
PCP4P48539 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.59□□□□□ -0.23
PCP4P48539 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PCP4P48539 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PCP4P48539 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PCP4P48539 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PCP4P48539 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.58□□□□□ -0.24
PCP4P48539 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
PCP4P48539 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.58□□□□□ -0.24
PCP4P48539 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
PCP4P48539 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PCP4P48539 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.57□□□□□ -0.24
PCP4P48539 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 CICP13-201ENST00000422015 2789 ntBASIC13.57□□□□□ -0.24
PCP4P48539 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.57□□□□□ -0.24
PCP4P48539 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.57□□□□□ -0.24
PCP4P48539 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.57□□□□□ -0.24
PCP4P48539 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PCP4P48539 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PCP4P48539 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PCP4P48539 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PCP4P48539 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 USP39-204ENST00000409766 2033 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.56□□□□□ -0.24
PCP4P48539 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PCP4P48539 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms