Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MDH1P40925 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
MDH1P40925 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.68■□□□□ 0.74
MDH1P40925 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MDH1P40925 FP475955.4-201ENST00000623131 1990 ntBASIC19.68■□□□□ 0.74
MDH1P40925 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
MDH1P40925 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
MDH1P40925 AC067852.2-201ENST00000590513 2313 ntBASIC19.68■□□□□ 0.74
MDH1P40925 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.67■□□□□ 0.74
MDH1P40925 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.67■□□□□ 0.74
MDH1P40925 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MDH1P40925 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MDH1P40925 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.67■□□□□ 0.74
MDH1P40925 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.67■□□□□ 0.74
MDH1P40925 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 AC233992.3-201ENST00000607491 485 ntBASIC19.67■□□□□ 0.74
MDH1P40925 AC120498.10-201ENST00000621827 505 ntBASIC19.67■□□□□ 0.74
MDH1P40925 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
MDH1P40925 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
MDH1P40925 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.67■□□□□ 0.74
MDH1P40925 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.67■□□□□ 0.74
MDH1P40925 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
MDH1P40925 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
MDH1P40925 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.66■□□□□ 0.74
MDH1P40925 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.66■□□□□ 0.74
MDH1P40925 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.66■□□□□ 0.74
MDH1P40925 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.66■□□□□ 0.74
MDH1P40925 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.66■□□□□ 0.74
MDH1P40925 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.66■□□□□ 0.74
MDH1P40925 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.66■□□□□ 0.74
MDH1P40925 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
MDH1P40925 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.66■□□□□ 0.74
MDH1P40925 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.66■□□□□ 0.74
MDH1P40925 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.66■□□□□ 0.74
MDH1P40925 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.66■□□□□ 0.74
MDH1P40925 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.65■□□□□ 0.74
MDH1P40925 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 AC007322.3-201ENST00000426526 701 ntBASIC19.65■□□□□ 0.74
MDH1P40925 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.65■□□□□ 0.74
MDH1P40925 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
MDH1P40925 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 TEX21P-204ENST00000641479 1693 ntBASIC19.65■□□□□ 0.74
MDH1P40925 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
MDH1P40925 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
MDH1P40925 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
MDH1P40925 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.64■□□□□ 0.74
MDH1P40925 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.64■□□□□ 0.73
MDH1P40925 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.64■□□□□ 0.73
MDH1P40925 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 PTBP1P-201ENST00000554374 1601 ntBASIC19.64■□□□□ 0.73
MDH1P40925 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.64■□□□□ 0.73
MDH1P40925 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.64■□□□□ 0.73
MDH1P40925 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.64■□□□□ 0.73
MDH1P40925 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.64■□□□□ 0.73
MDH1P40925 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
MDH1P40925 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
MDH1P40925 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
MDH1P40925 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
MDH1P40925 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms