Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN7P35236 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 TSPY6P-201ENST00000448518 926 ntBASIC20.25■□□□□ 0.83
PTPN7P35236 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN7P35236 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPN7P35236 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN7P35236 LINC01465-201ENST00000408887 1940 ntBASIC20.25■□□□□ 0.83
PTPN7P35236 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPN7P35236 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN7P35236 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPN7P35236 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPN7P35236 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPN7P35236 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PTPN7P35236 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN7P35236 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PTPN7P35236 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPN7P35236 HLA-B-256ENST00000639848 1089 ntBASIC20.24■□□□□ 0.83
PTPN7P35236 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPN7P35236 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPN7P35236 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN7P35236 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PTPN7P35236 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN7P35236 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 SLC29A4P1-201ENST00000398760 971 ntBASIC20.23■□□□□ 0.83
PTPN7P35236 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN7P35236 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.23■□□□□ 0.83
PTPN7P35236 RPS2P52-201ENST00000469610 820 ntBASIC20.23■□□□□ 0.83
PTPN7P35236 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.23■□□□□ 0.83
PTPN7P35236 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.23■□□□□ 0.83
PTPN7P35236 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PTPN7P35236 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PTPN7P35236 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PTPN7P35236 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 ZNF815P-204ENST00000434898 1737 ntBASIC20.22■□□□□ 0.83
PTPN7P35236 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN7P35236 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN7P35236 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PTPN7P35236 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN7P35236 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PTPN7P35236 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.22■□□□□ 0.83
PTPN7P35236 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.22■□□□□ 0.83
PTPN7P35236 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN7P35236 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.22■□□□□ 0.83
PTPN7P35236 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.22■□□□□ 0.83
PTPN7P35236 MIR4758-201ENST00000577688 71 ntBASIC20.22■□□□□ 0.83
PTPN7P35236 AC006557.6-201ENST00000623071 864 ntBASIC20.22■□□□□ 0.83
PTPN7P35236 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PTPN7P35236 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN7P35236 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.21■□□□□ 0.83
PTPN7P35236 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
PTPN7P35236 AC124283.5-201ENST00000624661 1809 ntBASIC20.21■□□□□ 0.83
PTPN7P35236 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.21■□□□□ 0.83
PTPN7P35236 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PTPN7P35236 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PTPN7P35236 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms