Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGA1P17096 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.38■□□□□ 0.85
HMGA1P17096 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.38■□□□□ 0.85
HMGA1P17096 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.38■□□□□ 0.85
HMGA1P17096 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
HMGA1P17096 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA1P17096 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA1P17096 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HMGA1P17096 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGA1P17096 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 KRT18P22-201ENST00000402024 1347 ntBASIC20.37■□□□□ 0.85
HMGA1P17096 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 CRYGFP-201ENST00000418459 633 ntBASIC20.37■□□□□ 0.85
HMGA1P17096 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
HMGA1P17096 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGA1P17096 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.37■□□□□ 0.85
HMGA1P17096 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HMGA1P17096 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HMGA1P17096 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HMGA1P17096 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 AC005521.1-201ENST00000393351 872 ntBASIC20.36■□□□□ 0.85
HMGA1P17096 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 TMPOP1-202ENST00000424642 1267 ntBASIC20.36■□□□□ 0.85
HMGA1P17096 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGA1P17096 AC091390.4-202ENST00000476426 537 ntBASIC20.36■□□□□ 0.85
HMGA1P17096 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
HMGA1P17096 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HMGA1P17096 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.36■□□□□ 0.85
HMGA1P17096 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HMGA1P17096 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HMGA1P17096 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
HMGA1P17096 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HMGA1P17096 CLDN5-201ENST00000403084 2357 ntBASIC20.35■□□□□ 0.85
HMGA1P17096 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HMGA1P17096 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.35■□□□□ 0.85
HMGA1P17096 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
HMGA1P17096 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 AC113347.1-201ENST00000413321 391 ntBASIC20.35■□□□□ 0.85
HMGA1P17096 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.35■□□□□ 0.85
HMGA1P17096 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGA1P17096 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.35■□□□□ 0.85
HMGA1P17096 SLC25A1P4-201ENST00000567977 778 ntBASIC20.35■□□□□ 0.85
HMGA1P17096 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.35■□□□□ 0.85
HMGA1P17096 AC092865.7-201ENST00000641832 219 ntBASIC20.35■□□□□ 0.85
HMGA1P17096 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HMGA1P17096 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
HMGA1P17096 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 LINC01465-201ENST00000408887 1940 ntBASIC20.35■□□□□ 0.85
HMGA1P17096 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HMGA1P17096 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HMGA1P17096 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
HMGA1P17096 LINC01006-201ENST00000333319 2292 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.34■□□□□ 0.85
HMGA1P17096 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.34■□□□□ 0.85
HMGA1P17096 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA1P17096 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA1P17096 TSPY14P-201ENST00000303979 915 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
HMGA1P17096 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGA1P17096 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.34■□□□□ 0.85
HMGA1P17096 C2orf69P3-201ENST00000565542 1120 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 AL160286.2-201ENST00000567150 934 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.34■□□□□ 0.85
HMGA1P17096 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA1P17096 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA1P17096 AL157384.1-201ENST00000445995 2473 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
HMGA1P17096 AC073508.3-201ENST00000619697 1419 ntBASIC20.34■□□□□ 0.85
HMGA1P17096 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HMGA1P17096 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms