Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXB3P14651 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXB3P14651 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXB3P14651 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.2■□□□□ 0.66
HOXB3P14651 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 AF186192.3-201ENST00000583427 947 ntBASIC19.2■□□□□ 0.66
HOXB3P14651 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXB3P14651 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXB3P14651 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HOXB3P14651 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.2■□□□□ 0.66
HOXB3P14651 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HOXB3P14651 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.19■□□□□ 0.66
HOXB3P14651 PKD1P6-201ENST00000343738 4769 ntBASIC19.19■□□□□ 0.66
HOXB3P14651 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 PVRIG2P-201ENST00000435460 978 ntBASIC19.19■□□□□ 0.66
HOXB3P14651 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.19■□□□□ 0.66
HOXB3P14651 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXB3P14651 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXB3P14651 AC023511.2-201ENST00000618803 211 ntBASIC19.19■□□□□ 0.66
HOXB3P14651 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXB3P14651 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.19■□□□□ 0.66
HOXB3P14651 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
HOXB3P14651 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
HOXB3P14651 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
HOXB3P14651 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
HOXB3P14651 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXB3P14651 KRT8P20-201ENST00000423953 1409 ntBASIC19.18■□□□□ 0.66
HOXB3P14651 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXB3P14651 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
HOXB3P14651 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 PCDHAC2-203ENST00000615316 3011 ntBASIC19.18■□□□□ 0.66
HOXB3P14651 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HOXB3P14651 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXB3P14651 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.18■□□□□ 0.66
HOXB3P14651 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.18■□□□□ 0.66
HOXB3P14651 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.18■□□□□ 0.66
HOXB3P14651 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HOXB3P14651 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
HOXB3P14651 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HOXB3P14651 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
HOXB3P14651 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXB3P14651 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
HOXB3P14651 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXB3P14651 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXB3P14651 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.17■□□□□ 0.66
HOXB3P14651 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.17■□□□□ 0.66
HOXB3P14651 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXB3P14651 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.17■□□□□ 0.66
HOXB3P14651 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
HOXB3P14651 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.17■□□□□ 0.66
HOXB3P14651 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HOXB3P14651 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
HOXB3P14651 KRT8P17-201ENST00000453110 1448 ntBASIC19.17■□□□□ 0.66
HOXB3P14651 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
HOXB3P14651 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
HOXB3P14651 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.16■□□□□ 0.66
HOXB3P14651 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXB3P14651 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXB3P14651 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HOXB3P14651 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.16■□□□□ 0.66
HOXB3P14651 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.16■□□□□ 0.66
HOXB3P14651 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HOXB3P14651 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms