Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TRGV3P03979 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.41■□□□□ 0.06
TRGV3P03979 KRT18P29-201ENST00000397031 1267 ntBASIC15.41■□□□□ 0.06
TRGV3P03979 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV3P03979 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV3P03979 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15.41■□□□□ 0.06
TRGV3P03979 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.41■□□□□ 0.06
TRGV3P03979 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV3P03979 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.41■□□□□ 0.06
TRGV3P03979 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
TRGV3P03979 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRGV3P03979 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC15.41■□□□□ 0.06
TRGV3P03979 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV3P03979 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV3P03979 ME2-218ENST00000640965 2476 ntTSL 5 BASIC15.4■□□□□ 0.06
TRGV3P03979 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
TRGV3P03979 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC15.4■□□□□ 0.06
TRGV3P03979 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV3P03979 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.4■□□□□ 0.06
TRGV3P03979 AC073648.6-201ENST00000641589 218 ntBASIC15.4■□□□□ 0.06
TRGV3P03979 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TRGV3P03979 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.4■□□□□ 0.06
TRGV3P03979 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TRGV3P03979 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 TMEM179-206ENST00000616017 1645 ntBASIC15.39■□□□□ 0.05
TRGV3P03979 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRGV3P03979 LBX2-AS1-202ENST00000603175 2083 ntBASIC15.39■□□□□ 0.05
TRGV3P03979 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV3P03979 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 AC128676.1-201ENST00000454392 318 ntBASIC15.39■□□□□ 0.05
TRGV3P03979 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV3P03979 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV3P03979 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TRGV3P03979 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 AC009237.14-201ENST00000609975 1594 ntBASIC15.39■□□□□ 0.05
TRGV3P03979 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.39■□□□□ 0.05
TRGV3P03979 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV3P03979 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TRGV3P03979 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.39■□□□□ 0.05
TRGV3P03979 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TRGV3P03979 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV3P03979 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV3P03979 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 TFP1-202ENST00000475455 1573 ntBASIC15.38■□□□□ 0.05
TRGV3P03979 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRGV3P03979 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TRGV3P03979 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.38■□□□□ 0.05
TRGV3P03979 AC233263.1-201ENST00000578059 224 ntBASIC15.38■□□□□ 0.05
TRGV3P03979 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
TRGV3P03979 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.38■□□□□ 0.05
TRGV3P03979 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.38■□□□□ 0.05
TRGV3P03979 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC15.38■□□□□ 0.05
TRGV3P03979 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TRGV3P03979 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 AP006587.1-201ENST00000534129 1502 ntBASIC15.38■□□□□ 0.05
TRGV3P03979 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
TRGV3P03979 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TRGV3P03979 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms