Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-AP01891 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HLA-AP01891 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.51■□□□□ 0.23
HLA-AP01891 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-AP01891 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.51■□□□□ 0.23
HLA-AP01891 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.51■□□□□ 0.23
HLA-AP01891 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLA-AP01891 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-AP01891 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-AP01891 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-AP01891 AL354811.1-201ENST00000610286 706 ntBASIC16.5■□□□□ 0.23
HLA-AP01891 AC120498.10-201ENST00000621827 505 ntBASIC16.5■□□□□ 0.23
HLA-AP01891 AL358852.1-201ENST00000623174 1268 ntBASIC16.5■□□□□ 0.23
HLA-AP01891 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HLA-AP01891 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.5■□□□□ 0.23
HLA-AP01891 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.5■□□□□ 0.23
HLA-AP01891 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HLA-AP01891 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-AP01891 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-AP01891 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-AP01891 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-AP01891 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 FZD10-202ENST00000539839 3282 ntBASIC16.49■□□□□ 0.23
HLA-AP01891 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-AP01891 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-AP01891 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-AP01891 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-AP01891 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-AP01891 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.48■□□□□ 0.23
HLA-AP01891 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-AP01891 AC019069.1-201ENST00000610008 1333 ntBASIC16.48■□□□□ 0.23
HLA-AP01891 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-AP01891 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-AP01891 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-AP01891 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-AP01891 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-AP01891 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-AP01891 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms