Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NDUFS3O75489 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.53■□□□□ 0.72
NDUFS3O75489 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS3O75489 AL121906.2-201ENST00000621597 723 ntBASIC19.53■□□□□ 0.72
NDUFS3O75489 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
NDUFS3O75489 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.53■□□□□ 0.72
NDUFS3O75489 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NDUFS3O75489 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NDUFS3O75489 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.53■□□□□ 0.72
NDUFS3O75489 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS3O75489 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS3O75489 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.52■□□□□ 0.72
NDUFS3O75489 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS3O75489 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS3O75489 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.52■□□□□ 0.72
NDUFS3O75489 AC008687.6-201ENST00000596318 630 ntBASIC19.52■□□□□ 0.72
NDUFS3O75489 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
NDUFS3O75489 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NDUFS3O75489 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
NDUFS3O75489 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NDUFS3O75489 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NDUFS3O75489 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
NDUFS3O75489 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
NDUFS3O75489 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.51■□□□□ 0.71
NDUFS3O75489 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.51■□□□□ 0.71
NDUFS3O75489 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.51■□□□□ 0.71
NDUFS3O75489 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NDUFS3O75489 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
NDUFS3O75489 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NDUFS3O75489 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NDUFS3O75489 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NDUFS3O75489 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
NDUFS3O75489 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.5■□□□□ 0.71
NDUFS3O75489 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.5■□□□□ 0.71
NDUFS3O75489 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.5■□□□□ 0.71
NDUFS3O75489 UNC93B4-201ENST00000505679 747 ntBASIC19.5■□□□□ 0.71
NDUFS3O75489 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.5■□□□□ 0.71
NDUFS3O75489 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NDUFS3O75489 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.5■□□□□ 0.71
NDUFS3O75489 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
NDUFS3O75489 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
NDUFS3O75489 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NDUFS3O75489 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms