Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GFRA3O60609 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.13■□□□□ 0.65
GFRA3O60609 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
GFRA3O60609 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GFRA3O60609 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
GFRA3O60609 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.12■□□□□ 0.65
GFRA3O60609 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.12■□□□□ 0.65
GFRA3O60609 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
GFRA3O60609 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.12■□□□□ 0.65
GFRA3O60609 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 AC012615.1-201ENST00000565797 1299 ntBASIC19.12■□□□□ 0.65
GFRA3O60609 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.12■□□□□ 0.65
GFRA3O60609 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
GFRA3O60609 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
GFRA3O60609 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.11■□□□□ 0.65
GFRA3O60609 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.11■□□□□ 0.65
GFRA3O60609 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.11■□□□□ 0.65
GFRA3O60609 MIR3197-201ENST00000582241 73 ntBASIC19.11■□□□□ 0.65
GFRA3O60609 AL353801.3-201ENST00000609898 542 ntBASIC19.11■□□□□ 0.65
GFRA3O60609 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.11■□□□□ 0.65
GFRA3O60609 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.11■□□□□ 0.65
GFRA3O60609 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.11■□□□□ 0.65
GFRA3O60609 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
GFRA3O60609 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
GFRA3O60609 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GFRA3O60609 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.1■□□□□ 0.65
GFRA3O60609 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.1■□□□□ 0.65
GFRA3O60609 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.1■□□□□ 0.65
GFRA3O60609 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.1■□□□□ 0.65
GFRA3O60609 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
GFRA3O60609 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GFRA3O60609 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
GFRA3O60609 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.1■□□□□ 0.65
GFRA3O60609 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
GFRA3O60609 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.1■□□□□ 0.65
GFRA3O60609 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
GFRA3O60609 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.09■□□□□ 0.65
GFRA3O60609 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.09■□□□□ 0.65
GFRA3O60609 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GFRA3O60609 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
GFRA3O60609 MIR940-201ENST00000401276 94 ntBASIC19.09■□□□□ 0.65
GFRA3O60609 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.09■□□□□ 0.65
GFRA3O60609 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GFRA3O60609 TPSP2-201ENST00000561760 610 ntBASIC19.09■□□□□ 0.65
GFRA3O60609 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.09■□□□□ 0.65
GFRA3O60609 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.09■□□□□ 0.65
GFRA3O60609 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GFRA3O60609 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
GFRA3O60609 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
GFRA3O60609 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
GFRA3O60609 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
GFRA3O60609 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.08■□□□□ 0.65
GFRA3O60609 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.08■□□□□ 0.65
GFRA3O60609 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
GFRA3O60609 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
GFRA3O60609 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
GFRA3O60609 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
GFRA3O60609 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.08■□□□□ 0.65
GFRA3O60609 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.08■□□□□ 0.64
GFRA3O60609 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
GFRA3O60609 DRAXINP1-201ENST00000437611 948 ntBASIC19.08■□□□□ 0.64
GFRA3O60609 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.08■□□□□ 0.64
GFRA3O60609 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.08■□□□□ 0.64
GFRA3O60609 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
GFRA3O60609 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.08■□□□□ 0.64
GFRA3O60609 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
GFRA3O60609 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.07■□□□□ 0.64
GFRA3O60609 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 PTBP1P-201ENST00000554374 1601 ntBASIC19.07■□□□□ 0.64
GFRA3O60609 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
GFRA3O60609 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms