Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
DLX3O60479 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
DLX3O60479 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
DLX3O60479 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
DLX3O60479 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.2■□□□□ 0.66
DLX3O60479 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DLX3O60479 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.2■□□□□ 0.66
DLX3O60479 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 AC092666.2-201ENST00000613287 246 ntBASIC19.2■□□□□ 0.66
DLX3O60479 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
DLX3O60479 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.2■□□□□ 0.66
DLX3O60479 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.2■□□□□ 0.66
DLX3O60479 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.2■□□□□ 0.66
DLX3O60479 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
DLX3O60479 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
DLX3O60479 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
DLX3O60479 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.2■□□□□ 0.66
DLX3O60479 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
DLX3O60479 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.19■□□□□ 0.66
DLX3O60479 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.19■□□□□ 0.66
DLX3O60479 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
DLX3O60479 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 TFP1-202ENST00000475455 1573 ntBASIC19.19■□□□□ 0.66
DLX3O60479 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.19■□□□□ 0.66
DLX3O60479 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
DLX3O60479 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
DLX3O60479 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.19■□□□□ 0.66
DLX3O60479 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DLX3O60479 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DLX3O60479 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.18■□□□□ 0.66
DLX3O60479 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.18■□□□□ 0.66
DLX3O60479 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
DLX3O60479 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.18■□□□□ 0.66
DLX3O60479 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DLX3O60479 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
DLX3O60479 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.17■□□□□ 0.66
DLX3O60479 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
DLX3O60479 AC120498.9-201ENST00000339021 3867 ntBASIC19.17■□□□□ 0.66
DLX3O60479 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DLX3O60479 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
DLX3O60479 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
DLX3O60479 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.17■□□□□ 0.66
DLX3O60479 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.17■□□□□ 0.66
DLX3O60479 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DLX3O60479 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.17■□□□□ 0.66
DLX3O60479 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.17■□□□□ 0.66
DLX3O60479 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
DLX3O60479 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms