Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.9■□□□□ 0.94
O00370 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
O00370 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
O00370 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
O00370 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
O00370 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.89■□□□□ 0.93
O00370 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20.89■□□□□ 0.93
O00370 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.89■□□□□ 0.93
O00370 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.89■□□□□ 0.93
O00370 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.89■□□□□ 0.93
O00370 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.89■□□□□ 0.93
O00370 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
O00370 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.89■□□□□ 0.93
O00370 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
O00370 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
O00370 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 AL020996.1-203ENST00000536896 2307 ntBASIC20.88■□□□□ 0.93
O00370 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.88■□□□□ 0.93
O00370 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.88■□□□□ 0.93
O00370 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.88■□□□□ 0.93
O00370 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.88■□□□□ 0.93
O00370 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.88■□□□□ 0.93
O00370 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
O00370 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
O00370 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
O00370 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
O00370 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
O00370 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
O00370 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
O00370 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.87■□□□□ 0.93
O00370 RN7SL471P-201ENST00000580476 299 ntBASIC20.87■□□□□ 0.93
O00370 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.87■□□□□ 0.93
O00370 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.87■□□□□ 0.93
O00370 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
O00370 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
O00370 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
O00370 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.87■□□□□ 0.93
O00370 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.87■□□□□ 0.93
O00370 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
O00370 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.86■□□□□ 0.93
O00370 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.86■□□□□ 0.93
O00370 AP006587.1-201ENST00000534129 1502 ntBASIC20.86■□□□□ 0.93
O00370 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.86■□□□□ 0.93
O00370 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.86■□□□□ 0.93
O00370 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
O00370 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
O00370 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
O00370 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
O00370 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
O00370 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
O00370 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.85■□□□□ 0.93
O00370 AC116562.4-201ENST00000641316 2276 ntBASIC20.85■□□□□ 0.93
O00370 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
O00370 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms