Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC01549A6NIU2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 AC007322.3-201ENST00000426526 701 ntBASIC13.92□□□□□ -0.18
LINC01549A6NIU2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 AL390961.4-201ENST00000623958 2535 ntBASIC13.92□□□□□ -0.18
LINC01549A6NIU2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC01549A6NIU2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 AC135050.7-201ENST00000624508 2218 ntBASIC13.91□□□□□ -0.18
LINC01549A6NIU2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 SAPCD2P1-201ENST00000395413 1184 ntBASIC13.91□□□□□ -0.18
LINC01549A6NIU2 AC097381.1-201ENST00000429019 1296 ntBASIC13.91□□□□□ -0.18
LINC01549A6NIU2 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC01549A6NIU2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
LINC01549A6NIU2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms