Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 MIR4758-201ENST00000577688 71 ntBASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TRIM49BA6NDI0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 BX323043.1-201ENST00000641006 1765 ntBASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRIM49BA6NDI0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 AC092368.3-202ENST00000574180 1591 ntBASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 RPS2P52-201ENST00000469610 820 ntBASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.58■■□□□ 1.05
TRIM49BA6NDI0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM49BA6NDI0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.58■■□□□ 1.04
TRIM49BA6NDI0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM49BA6NDI0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRIM49BA6NDI0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 AC097658.1-201ENST00000475555 843 ntBASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 AL109923.1-201ENST00000618799 583 ntBASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TRIM49BA6NDI0 TNXA-203ENST00000507684 2038 ntBASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.56■■□□□ 1.04
TRIM49BA6NDI0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 HLA-B-256ENST00000639848 1089 ntBASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 AC004408.2-201ENST00000623613 2777 ntBASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.55■■□□□ 1.04
TRIM49BA6NDI0 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms