Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
CCDC144AA2RUR9 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 AL445228.2-201ENST00000605589 952 ntBASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC28.22■■■□□ 2.11
CCDC144AA2RUR9 AC099778.1-201ENST00000568593 1911 ntBASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 MFAP1P1-201ENST00000442257 1255 ntBASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 EGLN1P1-201ENST00000531623 762 ntBASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 SLC25A1P4-201ENST00000567977 778 ntBASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CCDC144AA2RUR9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC28.2■■■□□ 2.11
CCDC144AA2RUR9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
CCDC144AA2RUR9 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCDC144AA2RUR9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCDC144AA2RUR9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CCDC144AA2RUR9 LINC01465-201ENST00000408887 1940 ntBASIC28.2■■■□□ 2.1
CCDC144AA2RUR9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 AL160286.2-201ENST00000567150 934 ntBASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CCDC144AA2RUR9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 FAM87A-204ENST00000613235 858 ntBASIC28.18■■■□□ 2.1
CCDC144AA2RUR9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 AC010203.1-204ENST00000548782 407 ntBASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.17■■■□□ 2.1
CCDC144AA2RUR9 CLN6-221ENST00000637494 765 ntTSL 5 BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms