Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TCRBV9S1A1TA0A576 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 GPX1P1-201ENST00000388829 606 ntBASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.71■□□□□ 0.75
TCRBV9S1A1TA0A576 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 AC005181.1-201ENST00000604782 1256 ntBASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 AL161938.1-201ENST00000569833 2180 ntBASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TCRBV9S1A1TA0A576 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms