Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 PCDHB18P-201ENST00000524813 2368 ntBASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AC053503.5-201ENST00000601508 636 ntBASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AL138724.1-201ENST00000606771 1088 ntBASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 AC061975.6-201ENST00000579045 1553 ntBASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.94□□□□□ -0.34
TRAV13-2A0A0B4J235 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 AC009113.1-201ENST00000570267 2443 ntBASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 PRTG-204ENST00000561292 833 ntTSL 3 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 AC008175.2-201ENST00000612840 297 ntBASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 KRT8P36-201ENST00000489121 1440 ntBASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRAV13-2A0A0B4J235 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 POU5F1P4-201ENST00000413175 1085 ntBASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 BRD4-212ENST00000630599 726 ntTSL 2 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 AC104581.1-202ENST00000635932 2618 ntBASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRAV13-2A0A0B4J235 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms