Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 AC091799.1-201ENST00000422823 811 ntBASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 AC004854.2-201ENST00000608450 1441 ntBASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
TRBV25-1A0A075B6N4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.1□□□□□ -0.15
TRBV25-1A0A075B6N4 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRBV25-1A0A075B6N4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.08□□□□□ -0.15
TRBV25-1A0A075B6N4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
TRBV25-1A0A075B6N4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms