Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 IKZF1-210ENST00000439701 3572 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 RBM7-209ENST00000624815 3587 ntTSL 3 BASIC2.02□□□□□ -2.09
KRTAP4-4Q9BYR3 WDR55-201ENST00000358337 4080 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 MIR646HG-207ENST00000432910 2043 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TCTN3-203ENST00000371217 2514 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC126603.1-201ENST00000557586 2512 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC35A4-201ENST00000323146 3041 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 DNAH2-203ENST00000572933 14955 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ITIH4-212ENST00000485816 2990 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RPH3A-219ENST00000551052 2961 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CRTAM-201ENST00000227348 2469 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 LRRC8B-202ENST00000358200 1957 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 KCNA10-201ENST00000369771 1959 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ZCCHC6-205ENST00000375960 4939 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AL137127.1-201ENST00000606379 3402 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 SLC3A1-202ENST00000409229 2909 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC093671.1-201ENST00000624981 2929 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC034229.3-201ENST00000606203 2436 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 GTF3C2-201ENST00000264720 3882 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CLEC4M-202ENST00000327325 1935 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 LRRC40-201ENST00000370952 2884 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 DHRS9-208ENST00000602501 2863 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FLJ36000-201ENST00000612344 3801 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CDK10-201ENST00000331006 3344 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 WWC2-205ENST00000504005 5247 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC004156.1-201ENST00000591866 3319 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PCDHGC3-202ENST00000611950 2849 ntAPPRIS ALT2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 C2CD3-202ENST00000334126 7960 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ABCF2P1-201ENST00000465687 1867 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CNOT2-201ENST00000229195 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 NCOA1-204ENST00000405141 7405 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TMC3-201ENST00000359440 4641 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FPGT-TNNI3K-203ENST00000370899 2752 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 SMIM7-208ENST00000487416 2776 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PCDHA10-203ENST00000562220 12358 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC02003-201ENST00000577573 1833 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FLJ42393-201ENST00000623801 2270 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 MST1L-202ENST00000455405 3184 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ZEB2-224ENST00000539609 4061 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 C2CD3-201ENST00000313663 6283 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 NLRP1-215ENST00000613500 4494 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CMTR1-201ENST00000373451 4033 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RABGEF1-208ENST00000510829 3553 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 LINC00222-207ENST00000448744 1751 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC023824.5-201ENST00000564059 1766 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 POLH-202ENST00000372236 3540 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 B3GALT5-201ENST00000343118 2606 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 EIF3D-201ENST00000216190 2155 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CELF1-205ENST00000395292 2191 ntAPPRIS P4 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 EXO1-202ENST00000366548 3473 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 C5orf56-201ENST00000337752 4767 ntAPPRIS P5 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CEACAM22P-201ENST00000446628 3016 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RBBP9-201ENST00000337227 3861 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CATSPER2-203ENST00000396879 3898 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC008758.4-201ENST00000435033 2593 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 ADPRH-201ENST00000357003 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC093831.2-201ENST00000624393 3427 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 AC008013.1-204ENST00000222396 623 ntTSL 4 BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RPL10P2-201ENST00000310599 670 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RNA5SP358-201ENST00000362973 117 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU6-888P-201ENST00000363010 101 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 RNU4-80P-201ENST00000363200 141 ntBASIC2.01□□□□□ -2.09
KRTAP4-4Q9BYR3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms