RNA–Protein interactions for RNA: ENST00000458580.6

EXD1-202, Transcript of exonuclease 3'-5' domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EXD1, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD1-202ENST00000458580 NISCHQ9Y2I1 1504 aa13.72□□□□□ -0.21
EXD1-202ENST00000458580 AEBP2Q6ZN18 517 aaPredicted RBP12.96□□□□□ -0.34
EXD1-202ENST00000458580 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.41
EXD1-202ENST00000458580 CCDC180Q9P1Z9 1646 aa11.72□□□□□ -0.53
EXD1-202ENST00000458580 ZCCHC6Q5VYS8 1495 aaKnown RBP11.63□□□□□ -0.55
EXD1-202ENST00000458580 SHROOM4Q9ULL8 1493 aa11.52□□□□□ -0.56
EXD1-202ENST00000458580 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
EXD1-202ENST00000458580 SUPT5HO00267 1087 aaKnown RBP11.3□□□□□ -0.6
EXD1-202ENST00000458580 PELP1Q8IZL8 1130 aaKnown RBP11.21□□□□□ -0.61
EXD1-202ENST00000458580 DCAF8L2P0C7V8 631 aa11.15□□□□□ -0.62
EXD1-202ENST00000458580 PHF23Q9BUL5 403 aaPredicted RBP11.11□□□□□ -0.63
EXD1-202ENST00000458580 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
EXD1-202ENST00000458580 MYT1Q01538 1121 aa11.03□□□□□ -0.64
EXD1-202ENST00000458580 ABCC9O60706 1549 aa10.97□□□□□ -0.65
EXD1-202ENST00000458580 SCRIBQ14160 1630 aa10.87□□□□□ -0.67
EXD1-202ENST00000458580 SENP3Q9H4L4 574 aaPredicted RBP10.84□□□□□ -0.67
EXD1-202ENST00000458580 RSF1Q96T23 1441 aaPredicted RBP10.84□□□□□ -0.67
EXD1-202ENST00000458580 NACADO15069 1562 aa10.82□□□□□ -0.68
EXD1-202ENST00000458580 HRCP23327 699 aa10.75□□□□□ -0.69
EXD1-202ENST00000458580 RB1CC1Q8TDY2 1594 aa10.74□□□□□ -0.69
EXD1-202ENST00000458580 LOC105371045A0A1W2PR82 267 aa10.68□□□□□ -0.7
EXD1-202ENST00000458580 CECR2Q9BXF3 1484 aa10.66□□□□□ -0.7
EXD1-202ENST00000458580 PCGF6Q9BYE7 350 aa10.65□□□□□ -0.7
EXD1-202ENST00000458580 SLC24A1O60721 1099 aa10.65□□□□□ -0.71
EXD1-202ENST00000458580 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
EXD1-202ENST00000458580 TRIM41Q8WV44 630 aa10.58□□□□□ -0.72
EXD1-202ENST00000458580 WIZO95785 1651 aa10.57□□□□□ -0.72
EXD1-202ENST00000458580 BAZ1AQ9NRL2 1556 aaPredicted RBP10.56□□□□□ -0.72
EXD1-202ENST00000458580 TTBK1Q5TCY1 1321 aaPredicted RBP10.55□□□□□ -0.72
EXD1-202ENST00000458580 TRIM26Q12899 539 aaPredicted RBP10.53□□□□□ -0.72
EXD1-202ENST00000458580 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
EXD1-202ENST00000458580 TOP2AP11388 1531 aaKnown RBP10.46□□□□□ -0.74
EXD1-202ENST00000458580 SMARCA4P51532 1647 aa10.45□□□□□ -0.74
EXD1-202ENST00000458580 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
EXD1-202ENST00000458580 PPARGC1BQ86YN6 1023 aaKnown RBP10.42□□□□□ -0.74
EXD1-202ENST00000458580 FAM9AQ8IZU1 332 aaPredicted RBP10.41□□□□□ -0.74
EXD1-202ENST00000458580 SMARCA2P51531 1590 aa10.39□□□□□ -0.75
EXD1-202ENST00000458580 CCDC88BA6NC98 1476 aa10.37□□□□□ -0.75
EXD1-202ENST00000458580 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
EXD1-202ENST00000458580 BICRAQ9NZM4 1560 aa10.33□□□□□ -0.76
EXD1-202ENST00000458580 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
EXD1-202ENST00000458580 ABCC8Q09428 1581 aa10.3□□□□□ -0.76
EXD1-202ENST00000458580 EEA1Q15075 1411 aa10.26□□□□□ -0.77
EXD1-202ENST00000458580 EHMT2Q96KQ7 1210 aa10.25□□□□□ -0.77
EXD1-202ENST00000458580 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
EXD1-202ENST00000458580 TNIKQ9UKE5 1360 aa10.21□□□□□ -0.78
EXD1-202ENST00000458580 SOGA1O94964 1423 aa10.21□□□□□ -0.78
EXD1-202ENST00000458580 PABPN1Q86U42 306 aaKnown RBP eCLIP10.19□□□□□ -0.78
EXD1-202ENST00000458580 SCAF1Q9H7N4 1312 aaKnown RBP10.18□□□□□ -0.78
EXD1-202ENST00000458580 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
EXD1-202ENST00000458580 ATAD2BQ9ULI0 1458 aa10.18□□□□□ -0.78
EXD1-202ENST00000458580 FOXD1Q16676 465 aa10.17□□□□□ -0.78
EXD1-202ENST00000458580 CSRNP3Q8WYN3 585 aa10.16□□□□□ -0.78
EXD1-202ENST00000458580 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
EXD1-202ENST00000458580 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
EXD1-202ENST00000458580 SYNJ1O43426 1573 aa10.12□□□□□ -0.79
EXD1-202ENST00000458580 BAZ1BQ9UIG0 1483 aaKnown RBP10.12□□□□□ -0.79
EXD1-202ENST00000458580 PLPPR3Q6T4P5 718 aa10.11□□□□□ -0.79
EXD1-202ENST00000458580 KIF21BO75037 1637 aa10.11□□□□□ -0.79
EXD1-202ENST00000458580 CEP164Q9UPV0 1460 aa10.09□□□□□ -0.79
EXD1-202ENST00000458580 UBTFP17480 764 aaKnown RBP10.05□□□□□ -0.8
EXD1-202ENST00000458580 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.04□□□□□ -0.8
EXD1-202ENST00000458580 TOP2BQ02880 1626 aa10.03□□□□□ -0.8
EXD1-202ENST00000458580 CCER1Q8TC90 406 aaPredicted RBP10.02□□□□□ -0.8
EXD1-202ENST00000458580 HMGXB3Q12766 1538 aa10.02□□□□□ -0.81
EXD1-202ENST00000458580 BIVM-ERCC5R4GMW8 1640 aa10.02□□□□□ -0.81
EXD1-202ENST00000458580 NCAPD3P42695 1498 aa10□□□□□ -0.81
EXD1-202ENST00000458580 PRKCSHP14314 528 aaPredicted RBP10□□□□□ -0.81
EXD1-202ENST00000458580 CLIP1P30622 1438 aa9.99□□□□□ -0.81
EXD1-202ENST00000458580 VPS8Q8N3P4 1428 aa9.98□□□□□ -0.81
EXD1-202ENST00000458580 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
EXD1-202ENST00000458580 ACIN1Q9UKV3 1341 aaKnown RBP9.96□□□□□ -0.81
EXD1-202ENST00000458580 ERICH3Q5RHP9 1530 aa9.95□□□□□ -0.82
EXD1-202ENST00000458580 PRXQ9BXM0 1461 aa9.94□□□□□ -0.82
EXD1-202ENST00000458580 DAXXQ9UER7 740 aaPredicted RBP9.92□□□□□ -0.82
EXD1-202ENST00000458580 CENPBP07199 599 aaPredicted RBP9.92□□□□□ -0.82
EXD1-202ENST00000458580 CUX1P39880 1505 aa9.91□□□□□ -0.82
EXD1-202ENST00000458580 APLP2Q06481 763 aa9.91□□□□□ -0.82
EXD1-202ENST00000458580 CFTRP13569 1480 aa9.91□□□□□ -0.82
EXD1-202ENST00000458580 ERICH6Q7L0X2 663 aa9.87□□□□□ -0.83
EXD1-202ENST00000458580 ARAP1Q96P48 1450 aa9.87□□□□□ -0.83
EXD1-202ENST00000458580 KIF27Q86VH2 1401 aa9.86□□□□□ -0.83
EXD1-202ENST00000458580 PRDM2Q13029 1718 aa9.85□□□□□ -0.83
EXD1-202ENST00000458580 DIEXFQ68CQ4 756 aaKnown RBP9.85□□□□□ -0.83
EXD1-202ENST00000458580 PPP6R1Q9UPN7 881 aa9.84□□□□□ -0.83
EXD1-202ENST00000458580 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
EXD1-202ENST00000458580 ADRA2BP18089 450 aa9.81□□□□□ -0.84
EXD1-202ENST00000458580 HNRNPUL2Q1KMD3 747 aaKnown RBP9.81□□□□□ -0.84
EXD1-202ENST00000458580 DNAJC5BQ9UF47 199 aa9.81□□□□□ -0.84
EXD1-202ENST00000458580 BCL11AQ9H165 835 aa9.79□□□□□ -0.84
EXD1-202ENST00000458580 ARHGAP35Q9NRY4 1499 aa9.77□□□□□ -0.84
EXD1-202ENST00000458580 CADPSQ9ULU8 1353 aa9.77□□□□□ -0.84
EXD1-202ENST00000458580 GTF3C3Q9Y5Q9 886 aa9.77□□□□□ -0.85
EXD1-202ENST00000458580 RRBP1Q9P2E9 1410 aaKnown RBP9.77□□□□□ -0.85
EXD1-202ENST00000458580 CLSPNQ9HAW4 1339 aa9.76□□□□□ -0.85
EXD1-202ENST00000458580 NEUROD1Q13562 356 aa9.76□□□□□ -0.85
EXD1-202ENST00000458580 IGF1RP08069 1367 aa9.75□□□□□ -0.85
EXD1-202ENST00000458580 RANGAP1P46060 587 aaPredicted RBP9.75□□□□□ -0.85
EXD1-202ENST00000458580 CUX2O14529 1486 aa9.74□□□□□ -0.85
EXD1-202ENST00000458580 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms