RNA–Protein interactions for RNA: ENST00000358337.9

WDR55-201, Transcript of WD repeat domain 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene WDR55, Length 4,080 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR55-201ENST00000358337 NISCHQ9Y2I1 1504 aa19.63■□□□□ 0.73
WDR55-201ENST00000358337 DCAF8L2P0C7V8 631 aa18.84■□□□□ 0.61
WDR55-201ENST00000358337 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
WDR55-201ENST00000358337 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
WDR55-201ENST00000358337 ABCC9O60706 1549 aa17.38■□□□□ 0.37
WDR55-201ENST00000358337 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
WDR55-201ENST00000358337 CCDC180Q9P1Z9 1646 aa16.61■□□□□ 0.25
WDR55-201ENST00000358337 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
WDR55-201ENST00000358337 FAM9AQ8IZU1 332 aaPredicted RBP16.3■□□□□ 0.2
WDR55-201ENST00000358337 RB1CC1Q8TDY2 1594 aa16.25■□□□□ 0.19
WDR55-201ENST00000358337 PCGF6Q9BYE7 350 aa16.23■□□□□ 0.19
WDR55-201ENST00000358337 ZCCHC6Q5VYS8 1495 aaKnown RBP16.2■□□□□ 0.18
WDR55-201ENST00000358337 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
WDR55-201ENST00000358337 NACADO15069 1562 aa16.12■□□□□ 0.17
WDR55-201ENST00000358337 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
WDR55-201ENST00000358337 CHIC1Q5VXU3 224 aa16.03■□□□□ 0.16
WDR55-201ENST00000358337 LOC105371045A0A1W2PR82 267 aa15.89■□□□□ 0.14
WDR55-201ENST00000358337 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
WDR55-201ENST00000358337 RANGAP1P46060 587 aaPredicted RBP15.78■□□□□ 0.12
WDR55-201ENST00000358337 DCAF1Q9Y4B6 1507 aa15.74■□□□□ 0.11
WDR55-201ENST00000358337 HRCP23327 699 aa15.72■□□□□ 0.11
WDR55-201ENST00000358337 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
WDR55-201ENST00000358337 UBTFP17480 764 aaKnown RBP15.65■□□□□ 0.1
WDR55-201ENST00000358337 APLP2Q06481 763 aa15.63■□□□□ 0.09
WDR55-201ENST00000358337 FBLN2P98095 1184 aa15.61■□□□□ 0.09
WDR55-201ENST00000358337 ATP1B4Q9UN42 357 aaPredicted RBP15.61■□□□□ 0.09
WDR55-201ENST00000358337 MYO15BQ96JP2 1530 aa15.6■□□□□ 0.09
WDR55-201ENST00000358337 TRIM26Q12899 539 aaPredicted RBP15.51■□□□□ 0.07
WDR55-201ENST00000358337 BAZ1BQ9UIG0 1483 aaKnown RBP15.45■□□□□ 0.06
WDR55-201ENST00000358337 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
WDR55-201ENST00000358337 CCER1Q8TC90 406 aaPredicted RBP15.42■□□□□ 0.06
WDR55-201ENST00000358337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.39■□□□□ 0.05
WDR55-201ENST00000358337 HNRNPUL2Q1KMD3 747 aaKnown RBP15.39■□□□□ 0.05
WDR55-201ENST00000358337 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
WDR55-201ENST00000358337 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
WDR55-201ENST00000358337 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
WDR55-201ENST00000358337 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
WDR55-201ENST00000358337 DNAJC5BQ9UF47 199 aa15.31■□□□□ 0.04
WDR55-201ENST00000358337 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
WDR55-201ENST00000358337 CHMP7Q8WUX9 453 aaPredicted RBP15.18■□□□□ 0.02
WDR55-201ENST00000358337 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
WDR55-201ENST00000358337 MYT1LQ9UL68 1186 aa15.17■□□□□ 0.02
WDR55-201ENST00000358337 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
WDR55-201ENST00000358337 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
WDR55-201ENST00000358337 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
WDR55-201ENST00000358337 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
WDR55-201ENST00000358337 ITGAEP38570 1179 aa15.08■□□□□ 0.01
WDR55-201ENST00000358337 CSRNP3Q8WYN3 585 aa15.06■□□□□ 0
WDR55-201ENST00000358337 CADPSQ9ULU8 1353 aa15.05■□□□□ 0
WDR55-201ENST00000358337 CENPBP07199 599 aaPredicted RBP15.05■□□□□ -0
WDR55-201ENST00000358337 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
WDR55-201ENST00000358337 P3H3Q8IVL6 736 aa15.03■□□□□ -0
WDR55-201ENST00000358337 ARID3CA6NKF2 412 aa14.98□□□□□ -0.01
WDR55-201ENST00000358337 NCAPD3P42695 1498 aa14.97□□□□□ -0.01
WDR55-201ENST00000358337 SMARCA4P51532 1647 aa14.96□□□□□ -0.01
WDR55-201ENST00000358337 CC2D2AQ9P2K1 1620 aa14.95□□□□□ -0.02
WDR55-201ENST00000358337 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
WDR55-201ENST00000358337 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
WDR55-201ENST00000358337 WRNQ14191 1432 aaPredicted RBP eCLIP14.92□□□□□ -0.02
WDR55-201ENST00000358337 WIZO95785 1651 aa14.88□□□□□ -0.03
WDR55-201ENST00000358337 DIEXFQ68CQ4 756 aaKnown RBP14.86□□□□□ -0.03
WDR55-201ENST00000358337 TDRD9Q8NDG6 1382 aaKnown RBP14.83□□□□□ -0.04
WDR55-201ENST00000358337 CEP164Q9UPV0 1460 aa14.83□□□□□ -0.04
WDR55-201ENST00000358337 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
WDR55-201ENST00000358337 FANCD2Q9BXW9 1451 aa14.79□□□□□ -0.04
WDR55-201ENST00000358337 PELP1Q8IZL8 1130 aaKnown RBP14.79□□□□□ -0.04
WDR55-201ENST00000358337 SOGA1O94964 1423 aa14.79□□□□□ -0.04
WDR55-201ENST00000358337 CDK11AQ9UQ88 783 aaPredicted RBP14.78□□□□□ -0.04
WDR55-201ENST00000358337 KIF27Q86VH2 1401 aa14.77□□□□□ -0.05
WDR55-201ENST00000358337 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
WDR55-201ENST00000358337 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
WDR55-201ENST00000358337 OSCARQ8IYS5 282 aa14.73□□□□□ -0.05
WDR55-201ENST00000358337 NESP48681 1621 aa14.73□□□□□ -0.05
WDR55-201ENST00000358337 CUX2O14529 1486 aa14.72□□□□□ -0.05
WDR55-201ENST00000358337 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
WDR55-201ENST00000358337 KCNH8Q96L42 1107 aa14.67□□□□□ -0.06
WDR55-201ENST00000358337 ZNF777Q9ULD5 760 aaPredicted RBP14.67□□□□□ -0.06
WDR55-201ENST00000358337 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
WDR55-201ENST00000358337 HMGXB3Q12766 1538 aa14.63□□□□□ -0.07
WDR55-201ENST00000358337 CARMIL1Q5VZK9 1371 aa14.62□□□□□ -0.07
WDR55-201ENST00000358337 CYB5RLQ6IPT4 315 aa14.62□□□□□ -0.07
WDR55-201ENST00000358337 ABCC8Q09428 1581 aa14.61□□□□□ -0.07
WDR55-201ENST00000358337 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
WDR55-201ENST00000358337 SLC24A1O60721 1099 aa14.58□□□□□ -0.07
WDR55-201ENST00000358337 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
WDR55-201ENST00000358337 ACIN1Q9UKV3 1341 aaKnown RBP14.57□□□□□ -0.08
WDR55-201ENST00000358337 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
WDR55-201ENST00000358337 ZNF316A6NFI3 1004 aaPredicted RBP14.56□□□□□ -0.08
WDR55-201ENST00000358337 CFTRP13569 1480 aa14.56□□□□□ -0.08
WDR55-201ENST00000358337 ESF1Q9H501 851 aaKnown RBP14.56□□□□□ -0.08
WDR55-201ENST00000358337 CLIP1P30622 1438 aa14.56□□□□□ -0.08
WDR55-201ENST00000358337 SCAF1Q9H7N4 1312 aaKnown RBP14.55□□□□□ -0.08
WDR55-201ENST00000358337 EEA1Q15075 1411 aa14.54□□□□□ -0.08
WDR55-201ENST00000358337 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
WDR55-201ENST00000358337 JPH4Q96JJ6 628 aa14.52□□□□□ -0.08
WDR55-201ENST00000358337 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
WDR55-201ENST00000358337 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
WDR55-201ENST00000358337 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
WDR55-201ENST00000358337 AQRO60306 1485 aaKnown RBP eCLIP14.48□□□□□ -0.092e-11■■■■■ 45.6
WDR55-201ENST00000358337 TRIM52Q96A61 297 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms