RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 NISCHQ9Y2I1 1504 aa19.91■□□□□ 0.78
TMC3-201ENST00000359440 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
TMC3-201ENST00000359440 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
TMC3-201ENST00000359440 SHROOM4Q9ULL8 1493 aa18.29■□□□□ 0.52
TMC3-201ENST00000359440 ZEB1P37275 1124 aaPredicted RBP17.78■□□□□ 0.44
TMC3-201ENST00000359440 PCGF6Q9BYE7 350 aa17.77■□□□□ 0.44
TMC3-201ENST00000359440 PELP1Q8IZL8 1130 aaKnown RBP17.65■□□□□ 0.42
TMC3-201ENST00000359440 HRCP23327 699 aa17.51■□□□□ 0.39
TMC3-201ENST00000359440 CENPBP07199 599 aaPredicted RBP17.41■□□□□ 0.38
TMC3-201ENST00000359440 TRIM41Q8WV44 630 aa17.38■□□□□ 0.37
TMC3-201ENST00000359440 APLP2Q06481 763 aa17.36■□□□□ 0.37
TMC3-201ENST00000359440 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
TMC3-201ENST00000359440 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.37
TMC3-201ENST00000359440 MYT1Q01538 1121 aa17.32■□□□□ 0.36
TMC3-201ENST00000359440 FAM9AQ8IZU1 332 aaPredicted RBP17.31■□□□□ 0.36
TMC3-201ENST00000359440 CHIC1Q5VXU3 224 aa17.29■□□□□ 0.36
TMC3-201ENST00000359440 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
TMC3-201ENST00000359440 LOC105371045A0A1W2PR82 267 aa16.9■□□□□ 0.3
TMC3-201ENST00000359440 UBTFP17480 764 aaKnown RBP16.89■□□□□ 0.29
TMC3-201ENST00000359440 TTBK1Q5TCY1 1321 aaPredicted RBP16.88■□□□□ 0.29
TMC3-201ENST00000359440 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
TMC3-201ENST00000359440 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
TMC3-201ENST00000359440 ZCCHC6Q5VYS8 1495 aaKnown RBP16.68■□□□□ 0.26
TMC3-201ENST00000359440 NEFLP07196 543 aa16.67■□□□□ 0.26
TMC3-201ENST00000359440 ERICH6Q7L0X2 663 aa16.64■□□□□ 0.25
TMC3-201ENST00000359440 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
TMC3-201ENST00000359440 DIEXFQ68CQ4 756 aaKnown RBP16.58■□□□□ 0.25
TMC3-201ENST00000359440 RANGAP1P46060 587 aaPredicted RBP16.54■□□□□ 0.24
TMC3-201ENST00000359440 CCDC180Q9P1Z9 1646 aa16.5■□□□□ 0.23
TMC3-201ENST00000359440 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.48■□□□□ 0.23
TMC3-201ENST00000359440 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
TMC3-201ENST00000359440 ATP1B4Q9UN42 357 aaPredicted RBP16.35■□□□□ 0.21
TMC3-201ENST00000359440 ACIN1Q9UKV3 1341 aaKnown RBP16.34■□□□□ 0.21
TMC3-201ENST00000359440 GTF3C3Q9Y5Q9 886 aa16.31■□□□□ 0.2
TMC3-201ENST00000359440 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
TMC3-201ENST00000359440 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
TMC3-201ENST00000359440 MYO15BQ96JP2 1530 aa16.19■□□□□ 0.18
TMC3-201ENST00000359440 CSRNP3Q8WYN3 585 aa16.15■□□□□ 0.18
TMC3-201ENST00000359440 ITGAEP38570 1179 aa16.14■□□□□ 0.17
TMC3-201ENST00000359440 ABCC9O60706 1549 aa16.08■□□□□ 0.16
TMC3-201ENST00000359440 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
TMC3-201ENST00000359440 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
TMC3-201ENST00000359440 EEA1Q15075 1411 aa15.96■□□□□ 0.15
TMC3-201ENST00000359440 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.14
TMC3-201ENST00000359440 ANP32CO43423 234 aa15.95■□□□□ 0.14
TMC3-201ENST00000359440 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
TMC3-201ENST00000359440 FAM50AQ14320 339 aaKnown RBP15.91■□□□□ 0.14
TMC3-201ENST00000359440 DAXXQ9UER7 740 aaPredicted RBP15.89■□□□□ 0.13
TMC3-201ENST00000359440 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
TMC3-201ENST00000359440 RTL5Q5HYW3 569 aaPredicted RBP15.85■□□□□ 0.13
TMC3-201ENST00000359440 RB1CC1Q8TDY2 1594 aa15.83■□□□□ 0.12
TMC3-201ENST00000359440 PABPN1Q86U42 306 aaKnown RBP eCLIP15.78■□□□□ 0.12
TMC3-201ENST00000359440 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
TMC3-201ENST00000359440 TNIKQ9UKE5 1360 aa15.76■□□□□ 0.11
TMC3-201ENST00000359440 GOLGA3Q08378 1498 aa15.75■□□□□ 0.11
TMC3-201ENST00000359440 POLR3GLQ9BT43 218 aa15.75■□□□□ 0.11
TMC3-201ENST00000359440 BCANQ96GW7 911 aa15.75■□□□□ 0.11
TMC3-201ENST00000359440 NACADO15069 1562 aa15.73■□□□□ 0.11
TMC3-201ENST00000359440 CLIP1P30622 1438 aa15.72■□□□□ 0.11
TMC3-201ENST00000359440 TRIM52Q96A61 297 aa15.7■□□□□ 0.1
TMC3-201ENST00000359440 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
TMC3-201ENST00000359440 MIER1Q8N108 512 aa15.67■□□□□ 0.1
TMC3-201ENST00000359440 CEP164Q9UPV0 1460 aa15.62■□□□□ 0.09
TMC3-201ENST00000359440 TONSLQ96HA7 1378 aa15.62■□□□□ 0.09
TMC3-201ENST00000359440 FKBP8Q14318 412 aa15.61■□□□□ 0.09
TMC3-201ENST00000359440 BAZ1AQ9NRL2 1556 aaPredicted RBP15.6■□□□□ 0.09
TMC3-201ENST00000359440 WRNQ14191 1432 aaPredicted RBP eCLIP15.57■□□□□ 0.08
TMC3-201ENST00000359440 ANP32AP39687 249 aaKnown RBP15.55■□□□□ 0.08
TMC3-201ENST00000359440 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
TMC3-201ENST00000359440 CNGB1Q14028 1251 aaPredicted RBP15.5■□□□□ 0.07
TMC3-201ENST00000359440 HNRNPUQ00839 825 aaKnown RBP eCLIP15.47■□□□□ 0.07
TMC3-201ENST00000359440 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
TMC3-201ENST00000359440 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
TMC3-201ENST00000359440 TIMELESSQ9UNS1 1208 aa15.4■□□□□ 0.06
TMC3-201ENST00000359440 ANP32EQ9BTT0 268 aa15.39■□□□□ 0.05
TMC3-201ENST00000359440 VPS8Q8N3P4 1428 aa15.38■□□□□ 0.05
TMC3-201ENST00000359440 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
TMC3-201ENST00000359440 KIF27Q86VH2 1401 aa15.38■□□□□ 0.05
TMC3-201ENST00000359440 MROH2BQ7Z745 1585 aa15.35■□□□□ 0.05
TMC3-201ENST00000359440 MTUS2Q5JR59 1369 aa15.34■□□□□ 0.05
TMC3-201ENST00000359440 BAZ1BQ9UIG0 1483 aaKnown RBP15.33■□□□□ 0.04
TMC3-201ENST00000359440 SOGA1O94964 1423 aa15.31■□□□□ 0.04
TMC3-201ENST00000359440 SUPT16HQ9Y5B9 1047 aaKnown RBP15.31■□□□□ 0.04
TMC3-201ENST00000359440 EIF4G2P78344 907 aaKnown RBP eCLIP15.31■□□□□ 0.04
TMC3-201ENST00000359440 CCNB3Q8WWL7 1395 aa15.3■□□□□ 0.04
TMC3-201ENST00000359440 FAM9BQ8IZU0 186 aa15.28■□□□□ 0.04
TMC3-201ENST00000359440 CCDC136Q96JN2 1154 aa15.28■□□□□ 0.04
TMC3-201ENST00000359440 MRS2Q9HD23 443 aa15.28■□□□□ 0.04
TMC3-201ENST00000359440 CCDC88BA6NC98 1476 aa15.26■□□□□ 0.03
TMC3-201ENST00000359440 CCER2I3L3R5 266 aa15.26■□□□□ 0.03
TMC3-201ENST00000359440 ZBTB47Q9UFB7 747 aaPredicted RBP15.26■□□□□ 0.03
TMC3-201ENST00000359440 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
TMC3-201ENST00000359440 FHAD1B1AJZ9 1412 aa15.25■□□□□ 0.03
TMC3-201ENST00000359440 TMC1Q8TDI8 760 aa15.23■□□□□ 0.03
TMC3-201ENST00000359440 SLC4A1APQ9BWU0 796 aaKnown RBP15.21■□□□□ 0.02
TMC3-201ENST00000359440 CANXP27824 592 aaKnown RBP15.19■□□□□ 0.02
TMC3-201ENST00000359440 ABCC8Q09428 1581 aa15.18■□□□□ 0.02
TMC3-201ENST00000359440 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
TMC3-201ENST00000359440 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.17■□□□□ 0.02
TMC3-201ENST00000359440 PPP4R2Q9NY27 417 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms