RNA–Protein interactions for RNA: ENST00000400561.6

MICAL3-203, Transcript of microtubule associated monooxygenase, calponin and LIM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene MICAL3, Length 3,046 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MICAL3-203ENST00000400561 NISCHQ9Y2I1 1504 aa22.76■■□□□ 1.23
MICAL3-203ENST00000400561 SHROOM4Q9ULL8 1493 aa19.83■□□□□ 0.77
MICAL3-203ENST00000400561 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
MICAL3-203ENST00000400561 ZCCHC6Q5VYS8 1495 aaKnown RBP19.31■□□□□ 0.68
MICAL3-203ENST00000400561 HRCP23327 699 aa19.25■□□□□ 0.67
MICAL3-203ENST00000400561 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
MICAL3-203ENST00000400561 CHIC1Q5VXU3 224 aa19.21■□□□□ 0.67
MICAL3-203ENST00000400561 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
MICAL3-203ENST00000400561 PCGF6Q9BYE7 350 aa19.05■□□□□ 0.64
MICAL3-203ENST00000400561 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
MICAL3-203ENST00000400561 PPARGC1BQ86YN6 1023 aaKnown RBP18.88■□□□□ 0.61
MICAL3-203ENST00000400561 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
MICAL3-203ENST00000400561 LOC105371045A0A1W2PR82 267 aa18.73■□□□□ 0.59
MICAL3-203ENST00000400561 TRIM26Q12899 539 aaPredicted RBP18.53■□□□□ 0.56
MICAL3-203ENST00000400561 ABCC9O60706 1549 aa18.29■□□□□ 0.52
MICAL3-203ENST00000400561 ZEB1P37275 1124 aaPredicted RBP18.25■□□□□ 0.51
MICAL3-203ENST00000400561 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
MICAL3-203ENST00000400561 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
MICAL3-203ENST00000400561 FAM9AQ8IZU1 332 aaPredicted RBP18.15■□□□□ 0.5
MICAL3-203ENST00000400561 SCRIBQ14160 1630 aa18.1■□□□□ 0.49
MICAL3-203ENST00000400561 RB1CC1Q8TDY2 1594 aa18.07■□□□□ 0.48
MICAL3-203ENST00000400561 EHMT2Q96KQ7 1210 aa18.05■□□□□ 0.48
MICAL3-203ENST00000400561 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
MICAL3-203ENST00000400561 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
MICAL3-203ENST00000400561 CECR2Q9BXF3 1484 aa17.8■□□□□ 0.44
MICAL3-203ENST00000400561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.79■□□□□ 0.44
MICAL3-203ENST00000400561 MROH2BQ7Z745 1585 aa17.76■□□□□ 0.43
MICAL3-203ENST00000400561 CCER1Q8TC90 406 aaPredicted RBP17.74■□□□□ 0.43
MICAL3-203ENST00000400561 WIZO95785 1651 aa17.7■□□□□ 0.42
MICAL3-203ENST00000400561 ACIN1Q9UKV3 1341 aaKnown RBP17.68■□□□□ 0.42
MICAL3-203ENST00000400561 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
MICAL3-203ENST00000400561 NACADO15069 1562 aa17.6■□□□□ 0.41
MICAL3-203ENST00000400561 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
MICAL3-203ENST00000400561 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
MICAL3-203ENST00000400561 BAZ1AQ9NRL2 1556 aaPredicted RBP17.55■□□□□ 0.4
MICAL3-203ENST00000400561 EIF4G1Q04637 1599 aaKnown RBP17.54■□□□□ 0.4
MICAL3-203ENST00000400561 GTF3C3Q9Y5Q9 886 aa17.53■□□□□ 0.4
MICAL3-203ENST00000400561 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
MICAL3-203ENST00000400561 WRNQ14191 1432 aaPredicted RBP eCLIP17.47■□□□□ 0.395e-6■■■■■ 29.2
MICAL3-203ENST00000400561 ABCC8Q09428 1581 aa17.46■□□□□ 0.39
MICAL3-203ENST00000400561 CCDC88BA6NC98 1476 aa17.45■□□□□ 0.38
MICAL3-203ENST00000400561 CEP162Q5TB80 1403 aa17.44■□□□□ 0.38
MICAL3-203ENST00000400561 SOGA1O94964 1423 aa17.37■□□□□ 0.37
MICAL3-203ENST00000400561 TNIKQ9UKE5 1360 aa17.35■□□□□ 0.37
MICAL3-203ENST00000400561 TOP2AP11388 1531 aaKnown RBP17.35■□□□□ 0.37
MICAL3-203ENST00000400561 ZNF316A6NFI3 1004 aaPredicted RBP17.34■□□□□ 0.37
MICAL3-203ENST00000400561 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
MICAL3-203ENST00000400561 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
MICAL3-203ENST00000400561 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
MICAL3-203ENST00000400561 RUSC2Q8N2Y8 1516 aa17.28■□□□□ 0.36
MICAL3-203ENST00000400561 SMARCA4P51532 1647 aa17.26■□□□□ 0.35
MICAL3-203ENST00000400561 YTHDC1Q96MU7 727 aaKnown RBP17.26■□□□□ 0.35
MICAL3-203ENST00000400561 EEA1Q15075 1411 aa17.23■□□□□ 0.35
MICAL3-203ENST00000400561 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
MICAL3-203ENST00000400561 MIER1Q8N108 512 aa17.18■□□□□ 0.34
MICAL3-203ENST00000400561 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
MICAL3-203ENST00000400561 MYT1Q01538 1121 aa17.17■□□□□ 0.34
MICAL3-203ENST00000400561 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
MICAL3-203ENST00000400561 CEP164Q9UPV0 1460 aa17.04■□□□□ 0.32
MICAL3-203ENST00000400561 CLIP1P30622 1438 aa17.03■□□□□ 0.32
MICAL3-203ENST00000400561 KIF21BO75037 1637 aa17■□□□□ 0.31
MICAL3-203ENST00000400561 VPS8Q8N3P4 1428 aa16.99■□□□□ 0.31
MICAL3-203ENST00000400561 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
MICAL3-203ENST00000400561 APLP2Q06481 763 aa16.98■□□□□ 0.31
MICAL3-203ENST00000400561 RANGAP1P46060 587 aaPredicted RBP16.95■□□□□ 0.3
MICAL3-203ENST00000400561 RAPGEF2Q9Y4G8 1499 aa16.91■□□□□ 0.3
MICAL3-203ENST00000400561 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
MICAL3-203ENST00000400561 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.3
MICAL3-203ENST00000400561 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
MICAL3-203ENST00000400561 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
MICAL3-203ENST00000400561 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
MICAL3-203ENST00000400561 CLSPNQ9HAW4 1339 aa16.81■□□□□ 0.28
MICAL3-203ENST00000400561 SUPT16HQ9Y5B9 1047 aaKnown RBP16.77■□□□□ 0.28
MICAL3-203ENST00000400561 KANK4Q5T7N3 995 aaPredicted RBP16.74■□□□□ 0.27
MICAL3-203ENST00000400561 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
MICAL3-203ENST00000400561 TOP2BQ02880 1626 aa16.71■□□□□ 0.27
MICAL3-203ENST00000400561 ARAP1Q96P48 1450 aa16.7■□□□□ 0.26
MICAL3-203ENST00000400561 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
MICAL3-203ENST00000400561 PRXQ9BXM0 1461 aa16.65■□□□□ 0.26
MICAL3-203ENST00000400561 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
MICAL3-203ENST00000400561 BIVM-ERCC5R4GMW8 1640 aa16.62■□□□□ 0.25
MICAL3-203ENST00000400561 TSHZ2Q9NRE2 1034 aa16.6■□□□□ 0.25
MICAL3-203ENST00000400561 ITGAEP38570 1179 aa16.59■□□□□ 0.25
MICAL3-203ENST00000400561 KCNH8Q96L42 1107 aa16.58■□□□□ 0.24
MICAL3-203ENST00000400561 CUX2O14529 1486 aa16.58■□□□□ 0.24
MICAL3-203ENST00000400561 CCNB3Q8WWL7 1395 aa16.58■□□□□ 0.24
MICAL3-203ENST00000400561 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
MICAL3-203ENST00000400561 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
MICAL3-203ENST00000400561 KIF27Q86VH2 1401 aa16.5■□□□□ 0.23
MICAL3-203ENST00000400561 CUX1P39880 1505 aa16.49■□□□□ 0.23
MICAL3-203ENST00000400561 MAPKBP1O60336 1514 aa16.47■□□□□ 0.23
MICAL3-203ENST00000400561 BCANQ96GW7 911 aa16.46■□□□□ 0.23
MICAL3-203ENST00000400561 ANP32EQ9BTT0 268 aa16.45■□□□□ 0.22
MICAL3-203ENST00000400561 DDX10Q13206 875 aaKnown RBP16.44■□□□□ 0.22
MICAL3-203ENST00000400561 FKBP8Q14318 412 aa16.42■□□□□ 0.22
MICAL3-203ENST00000400561 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
MICAL3-203ENST00000400561 WDR97A6NE52 1622 aa16.4■□□□□ 0.22
MICAL3-203ENST00000400561 SETD5Q9C0A6 1442 aa16.39■□□□□ 0.21
MICAL3-203ENST00000400561 TIAM1Q13009 1591 aa16.37■□□□□ 0.21
MICAL3-203ENST00000400561 PPP1R15AO75807 674 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms