Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MRPS17P1-201ENST00000596009 3130 ntBASIC8.1□□□□□ -1.11
ALDH1A1P00352 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 CDY19P-201ENST00000411668 1613 ntBASIC8.1□□□□□ -1.11
ALDH1A1P00352 CDY18P-201ENST00000438294 1609 ntBASIC8.1□□□□□ -1.11
ALDH1A1P00352 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 SLC16A4-206ENST00000472422 2420 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
ALDH1A1P00352 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC8.1□□□□□ -1.11
ALDH1A1P00352 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
ALDH1A1P00352 AC079097.1-201ENST00000512187 1399 ntBASIC8.1□□□□□ -1.11
ALDH1A1P00352 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 ZNF595-204ENST00000609518 2115 ntAPPRIS ALT2 TSL 2 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 CTNNA2-218ENST00000541047 2870 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 SLC9B1P1-201ENST00000331172 1337 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC104964.2-201ENST00000562242 4641 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC127459.1-201ENST00000563129 2768 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 RNA5SP512-201ENST00000364550 120 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 RNU6-549P-201ENST00000384433 107 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC093719.1-202ENST00000392735 373 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 TANK-203ENST00000402568 878 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AL590143.1-201ENST00000405071 138 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 RN7SKP129-201ENST00000410288 299 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 NRBF2P2-201ENST00000413087 861 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AL009174.1-201ENST00000426577 416 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 TIMM9P3-201ENST00000428659 274 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 FMO7P-201ENST00000436045 768 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 PIP5K1P2-201ENST00000437005 1120 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 ATP6V1G1P4-201ENST00000438388 335 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC244505.5-201ENST00000443639 207 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 VDAC2P4-201ENST00000452925 711 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 RNU7-140P-201ENST00000459546 60 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 SNORD42A-201ENST00000459584 64 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC099340.1-201ENST00000475247 599 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 RN7SL214P-201ENST00000487317 265 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 FAM172BP-201ENST00000487497 1089 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 CBX1-205ENST00000495350 550 ntTSL 2 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 PGAM4P2-201ENST00000512491 721 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC026782.1-201ENST00000512952 449 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 RNA5SP278-201ENST00000517055 102 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC087752.2-201ENST00000521219 281 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC005519.1-201ENST00000554490 601 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC004825.1-201ENST00000555068 586 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 uc_338.31-201ENST00000615595 186 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 YWHAEP7-203ENST00000622054 312 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AC138207.6-201ENST00000579164 1967 ntBASIC8.09□□□□□ -1.11
ALDH1A1P00352 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
ALDH1A1P00352 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
ALDH1A1P00352 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
ALDH1A1P00352 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
ALDH1A1P00352 EIF4E2-202ENST00000409098 3448 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
ALDH1A1P00352 LMO3-204ENST00000354662 3574 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.12
ALDH1A1P00352 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 OR10AB1P-202ENST00000641219 1686 ntBASIC8.08□□□□□ -1.12
ALDH1A1P00352 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ALDH1A1P00352 LINC01427-204ENST00000635299 1978 ntTSL 5 BASIC8.08□□□□□ -1.12
ALDH1A1P00352 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms