RNA–Protein interactions for RNA: ENST00000361624.2

MT-CO1-201, Transcript of mitochondrially encoded cytochrome c oxidase I, humanhuman

APPRIS P1 BASIC

Gene MT-CO1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1-201ENST00000361624 AEBP2Q6ZN18 517 aaPredicted RBP20.95■□□□□ 0.94
MT-CO1-201ENST00000361624 CHIC1Q5VXU3 224 aa19.93■□□□□ 0.78
MT-CO1-201ENST00000361624 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
MT-CO1-201ENST00000361624 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
MT-CO1-201ENST00000361624 FOXD1Q16676 465 aa16.68■□□□□ 0.26
MT-CO1-201ENST00000361624 NISCHQ9Y2I1 1504 aa16.55■□□□□ 0.24
MT-CO1-201ENST00000361624 PLPPR3Q6T4P5 718 aa15.94■□□□□ 0.14
MT-CO1-201ENST00000361624 MSH5O43196 834 aa15.64■□□□□ 0.09
MT-CO1-201ENST00000361624 PPP6R1Q9UPN7 881 aa15.58■□□□□ 0.09
MT-CO1-201ENST00000361624 PIAS4Q8N2W9 510 aaPredicted RBP15.58■□□□□ 0.08
MT-CO1-201ENST00000361624 ADRA2BP18089 450 aa15.53■□□□□ 0.08
MT-CO1-201ENST00000361624 POTEDQ86YR6 584 aa15.23■□□□□ 0.03
MT-CO1-201ENST00000361624 CCDC180Q9P1Z9 1646 aa14.39□□□□□ -0.11
MT-CO1-201ENST00000361624 SCAF1Q9H7N4 1312 aaKnown RBP14.28□□□□□ -0.12
MT-CO1-201ENST00000361624 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
MT-CO1-201ENST00000361624 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
MT-CO1-201ENST00000361624 ABCC9O60706 1549 aa14.15□□□□□ -0.14
MT-CO1-201ENST00000361624 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
MT-CO1-201ENST00000361624 ZCCHC6Q5VYS8 1495 aaKnown RBP13.88□□□□□ -0.19
MT-CO1-201ENST00000361624 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
MT-CO1-201ENST00000361624 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
MT-CO1-201ENST00000361624 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
MT-CO1-201ENST00000361624 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
MT-CO1-201ENST00000361624 RNF216Q9NWF9 866 aaPredicted RBP13.59□□□□□ -0.23
MT-CO1-201ENST00000361624 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
MT-CO1-201ENST00000361624 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
MT-CO1-201ENST00000361624 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
MT-CO1-201ENST00000361624 RB1CC1Q8TDY2 1594 aa13.49□□□□□ -0.25
MT-CO1-201ENST00000361624 NACADO15069 1562 aa13.48□□□□□ -0.25
MT-CO1-201ENST00000361624 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
MT-CO1-201ENST00000361624 CACNB1Q02641 598 aaPredicted RBP13.39□□□□□ -0.27
MT-CO1-201ENST00000361624 RNF39Q9H2S5 420 aa13.34□□□□□ -0.27
MT-CO1-201ENST00000361624 SCRIBQ14160 1630 aa13.3□□□□□ -0.28
MT-CO1-201ENST00000361624 UNC13AQ9UPW8 1703 aa13.29□□□□□ -0.28
MT-CO1-201ENST00000361624 DNAJC5BQ9UF47 199 aa13.29□□□□□ -0.28
MT-CO1-201ENST00000361624 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
MT-CO1-201ENST00000361624 PABPN1Q86U42 306 aaKnown RBP eCLIP13.2□□□□□ -0.3
MT-CO1-201ENST00000361624 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
MT-CO1-201ENST00000361624 C1QBPQ07021 282 aaKnown RBP13.18□□□□□ -0.3
MT-CO1-201ENST00000361624 SUPT5HO00267 1087 aaKnown RBP13.03□□□□□ -0.32
MT-CO1-201ENST00000361624 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.03□□□□□ -0.32
MT-CO1-201ENST00000361624 KCNA4P22459 653 aa12.94□□□□□ -0.34
MT-CO1-201ENST00000361624 CECR2Q9BXF3 1484 aa12.89□□□□□ -0.35
MT-CO1-201ENST00000361624 RSF1Q96T23 1441 aaPredicted RBP12.84□□□□□ -0.35
MT-CO1-201ENST00000361624 EIF4G1Q04637 1599 aaKnown RBP12.8□□□□□ -0.36
MT-CO1-201ENST00000361624 BAZ1AQ9NRL2 1556 aaPredicted RBP12.79□□□□□ -0.36
MT-CO1-201ENST00000361624 MROH2BQ7Z745 1585 aa12.79□□□□□ -0.36
MT-CO1-201ENST00000361624 CC2D2AQ9P2K1 1620 aa12.78□□□□□ -0.36
MT-CO1-201ENST00000361624 U3KPZ7 1027 aaPredicted RBP12.73□□□□□ -0.37
MT-CO1-201ENST00000361624 SMARCA4P51532 1647 aa12.71□□□□□ -0.38
MT-CO1-201ENST00000361624 WIZO95785 1651 aa12.65□□□□□ -0.38
MT-CO1-201ENST00000361624 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
MT-CO1-201ENST00000361624 ATAD2BQ9ULI0 1458 aa12.56□□□□□ -0.4
MT-CO1-201ENST00000361624 PEG3Q9GZU2 1588 aa12.54□□□□□ -0.4
MT-CO1-201ENST00000361624 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
MT-CO1-201ENST00000361624 TOP2AP11388 1531 aaKnown RBP12.54□□□□□ -0.4
MT-CO1-201ENST00000361624 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
MT-CO1-201ENST00000361624 CAPN15O75808 1086 aa12.53□□□□□ -0.4
MT-CO1-201ENST00000361624 BAZ1BQ9UIG0 1483 aaKnown RBP12.5□□□□□ -0.41
MT-CO1-201ENST00000361624 DSG3P32926 999 aa12.47□□□□□ -0.41
MT-CO1-201ENST00000361624 NCAPD3P42695 1498 aa12.46□□□□□ -0.41
MT-CO1-201ENST00000361624 APLP2Q06481 763 aa12.44□□□□□ -0.42
MT-CO1-201ENST00000361624 CCDC88BA6NC98 1476 aa12.44□□□□□ -0.42
MT-CO1-201ENST00000361624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
MT-CO1-201ENST00000361624 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
MT-CO1-201ENST00000361624 HMGXB3Q12766 1538 aa12.41□□□□□ -0.42
MT-CO1-201ENST00000361624 SAMD1Q6SPF0 538 aaPredicted RBP12.35□□□□□ -0.43
MT-CO1-201ENST00000361624 ZNF219Q9P2Y4 722 aaPredicted RBP12.34□□□□□ -0.43
MT-CO1-201ENST00000361624 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
MT-CO1-201ENST00000361624 NESP48681 1621 aa12.25□□□□□ -0.45
MT-CO1-201ENST00000361624 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
MT-CO1-201ENST00000361624 MYCNP04198 464 aaPredicted RBP12.24□□□□□ -0.45
MT-CO1-201ENST00000361624 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
MT-CO1-201ENST00000361624 ABCB7O75027 752 aa12.21□□□□□ -0.45
MT-CO1-201ENST00000361624 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
MT-CO1-201ENST00000361624 CFTRP13569 1480 aa12.16□□□□□ -0.46
MT-CO1-201ENST00000361624 ABCC8Q09428 1581 aa12.14□□□□□ -0.47
MT-CO1-201ENST00000361624 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
MT-CO1-201ENST00000361624 WRNQ14191 1432 aaPredicted RBP eCLIP12.1□□□□□ -0.47
MT-CO1-201ENST00000361624 LAMC3Q9Y6N6 1575 aa12.1□□□□□ -0.47
MT-CO1-201ENST00000361624 FOXD4L1Q9NU39 408 aa12.1□□□□□ -0.47
MT-CO1-201ENST00000361624 KIF21AQ7Z4S6 1674 aa12.09□□□□□ -0.47
MT-CO1-201ENST00000361624 THOC2Q8NI27 1593 aaKnown RBP12.06□□□□□ -0.48
MT-CO1-201ENST00000361624 FAM9AQ8IZU1 332 aaPredicted RBP12.04□□□□□ -0.48
MT-CO1-201ENST00000361624 POLA2Q14181 598 aa12.02□□□□□ -0.48
MT-CO1-201ENST00000361624 FANCD2Q9BXW9 1451 aa12.02□□□□□ -0.49
MT-CO1-201ENST00000361624 SYNJ1O43426 1573 aa12.01□□□□□ -0.49
MT-CO1-201ENST00000361624 PDS5BQ9NTI5 1447 aa12□□□□□ -0.49
MT-CO1-201ENST00000361624 CUX2O14529 1486 aa12□□□□□ -0.49
MT-CO1-201ENST00000361624 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
MT-CO1-201ENST00000361624 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
MT-CO1-201ENST00000361624 CUX1P39880 1505 aa11.95□□□□□ -0.5
MT-CO1-201ENST00000361624 TOP2BQ02880 1626 aa11.95□□□□□ -0.5
MT-CO1-201ENST00000361624 POTEHQ6S545 545 aa11.95□□□□□ -0.5
MT-CO1-201ENST00000361624 LOC105371045A0A1W2PR82 267 aa11.94□□□□□ -0.5
MT-CO1-201ENST00000361624 SOGA1O94964 1423 aa11.93□□□□□ -0.5
MT-CO1-201ENST00000361624 RBM42Q9BTD8 480 aaKnown RBP11.93□□□□□ -0.5
MT-CO1-201ENST00000361624 MRC2Q9UBG0 1479 aa11.92□□□□□ -0.5
MT-CO1-201ENST00000361624 ATF5Q9Y2D1 282 aaPredicted RBP11.92□□□□□ -0.5
MT-CO1-201ENST00000361624 BIVM-ERCC5R4GMW8 1640 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms